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contig_metadata

11 rows where bioproject = "PRJEB4632" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJEB4632 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3887691 3887691 PRJEB4632_P_NODE_824_length_248_cov_2.165714_g786_i0 PRJEB4632 824 248 2.165714 5.37097072 Euglena viridis 3040 Euglenozoa other_Eukaryota 422 1.48e-113   NTclustered gi|20386044|gb|AF445460.1| 3040 g786 i0 97.211 24.0282258064516 251 4 100 2 1 248 1276 1026 Euglena viridis 18S small subunit ribosomal RNA gene, partial sequence blastn 5959 422 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena viridis
4817901 4817901 PRJEB4632_P_NODE_1044_length_227_cov_2.500000_g1006_i0 PRJEB4632 1044 227 2.5 5.675 Monomorphina 298266 Euglenozoa other_Eukaryota 300 6.54e-77   NTclustered gi|54634948|gb|AY626054.1| 158828 g1006 i0 90.749 99.8590308370044 227 18 100 1 1 227 324 101 Monomorphina striata strain CCAP 1261/9 16S small subunit ribosomal RNA gene, partial sequence; chloroplast blastn 22668 300 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Monomorphina Monomorphina striata
5163908 5163908 PRJEB4632_P_NODE_205_length_538_cov_2.875269_g167_i0 PRJEB4632 205 538 2.875269 15.46894722 Euglena archaeoplastidiata 1188008 Euglenozoa other_Eukaryota 739 0   NTclustered gi|1211677883|ref|NC_035156.1| 1188008 g167 i0 91.745 115.855018587361 533 42 99 2 1 531 92692 93224 Euglena archaeoplastidiata isolate MI 67 chloroplast, complete genome blastn 62330 739 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena archaeoplastidiata
6093188 6093188 PRJEB4632_P_NODE_445_length_327_cov_1.944882_g407_i0 PRJEB4632 445 327 1.944882 6.35976414 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 604 1.8799999999999993e-168   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g407 i0 100 62.076452599388404 327 0 100 0 1 327 220 546 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 20299 604 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
8643185 8643185 PRJEB4632_P_NODE_467_length_322_cov_4.726908_g429_i0 PRJEB4632 467 322 4.726908 15.22064376 Bodo 5712 Euglenozoa other_Eukaryota 568 2.4299999999999993e-157   NTclustered gi|225216789|gb|FJ176704.1| 75058 g429 i0 98.447 141.512422360248 322 5 100 0 1 322 432 111 Bodo saltans HFCC12 28S ribosomal RNA gene, partial sequence blastn 45567 568 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
11539796 11539796 PRJEB4632_P_NODE_510_length_311_cov_1.256303_g472_i0 PRJEB4632 510 311 1.256303 3.90710233 Euglenaria anabaena 38273 Euglenozoa other_Eukaryota 424 5.35e-114   NTclustered gi|270313104|gb|FJ719720.1| 38273 g472 i0 92.131 98.491961414791 305 16 96 5 13 311 535 837 Euglena anabaena strain Jilnal030207G 23S ribosomal RNA gene, partial sequence; chloroplast blastn 30631 424 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglenaria Euglenaria anabaena
12815027 12815027 PRJEB4632_P_NODE_751_length_251_cov_1.651685_g713_i0 PRJEB4632 751 251 1.651685 4.14572935 Neobodo designis 312471 Euglenozoa other_Eukaryota 407 4.2099999999999995e-109   NTclustered gi|197723537|gb|EF681922.2| 312471 g713 i0 96.016 159.681274900398 251 9 100 1 1 251 1220 971 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 40080 407 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
15363792 15363792 PRJEB4632_P_NODE_573_length_293_cov_2.813636_g535_i0 PRJEB4632 573 293 2.813636 8.24395348 Euglenaria anabaena 38273 Euglenozoa other_Eukaryota 265 3.21e-66   NTclustered gi|209362336|gb|DQ140119.2| 215710 g535 i0 84.783 69.4539249146758 276 28 92 13 24 293 187 454 Euglena anabaena var. minima isolate New Jersey (NJ) 05 large subunit ribosomal RNA gene, partial sequence blastn 20350 265 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglenaria Euglenaria anabaena
20116591 20116591 PRJEB4632_P_NODE_696_length_262_cov_3.047619_g658_i0 PRJEB4632 696 262 3.047619 7.98476178 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 324 4.59e-84   NTclustered gi|2593250474|emb|OY748421.1| 5660 g658 i0 93.953 126.351145038168 215 11 82 2 49 262 990025 989812 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 33104 324 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
23013534 23013534 PRJEB4632_P_NODE_319_length_411_cov_2.789941_g281_i0 PRJEB4632 319 411 2.789941 11.46665751 Euglena viridis 3040 Euglenozoa other_Eukaryota 680 0   NTclustered gi|20386044|gb|AF445460.1| 3040 g281 i0 96.602 47.0048661800487 412 11 100 2 1 411 646 1055 Euglena viridis 18S small subunit ribosomal RNA gene, partial sequence blastn 19319 680 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena viridis
25216186 25216186 PRJEB4632_P_NODE_780_length_250_cov_1.621469_g742_i0 PRJEB4632 780 250 1.621469 4.0536725 Euglenales 86650 Euglenozoa other_Eukaryota 329 9.34e-86   NTclustered gi|498662898|ref|NC_020460.2| 3040 g742 i0 90.4 106.148 250 24 100 0 1 250 11450 11699 Euglena viridis culture-collection ATCC:PRA110 chloroplast, complete genome blastn 26537 329 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;