contig_metadata
4 rows where bioproject = "PRJEB43370" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7712599 | 7712599 | PRJEB43370_P_NODE_4847_length_205_cov_1.000000_g4804_i0 | PRJEB43370 | 4847 | 205 | 1 | 2.05 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 121 | 4.839999999999999e-23 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g4804 | i0 | 77.941 | 30.380487804878 | 204 | 37 | 98 | 8 | 1 | 200 | 3078687 | 3078886 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 6228 | 121 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 26621862 | 26621862 | PRJEB43370_P_NODE_7761_length_169_cov_0.866667_g7718_i0 | PRJEB43370 | 7761 | 169 | 0.866667 | 1.46466723 | Terrimicrobium sacchariphilum | 690879 | Bacteria | Bacteria | 47.4 | 3.04e-4 | NR | WP_075079027.1 | 690879 | g7718 | i0 | 58.8 | 0.603550295857988 | 34 | 14 | 60.4 | 0 | 167 | 66 | 290 | 323 | WP_075079027.1 hypothetical protein [Terrimicrobium sacchariphilum] | diamond | 102 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobium | Terrimicrobium sacchariphilum | |
| 27627250 | 27627250 | PRJEB43370_P_NODE_4364_length_214_cov_1.260606_g4321_i0 | PRJEB43370 | 4364 | 214 | 1.260606 | 2.69769684 | Bacteria | 2 | Bacteria | Bacteria | 101 | 1.0399999999999997e-23 | NR | MFA5258231.1 | 2026772 | g4321 | i0 | 65.7 | 5.60747663551402 | 67 | 23 | 93.9 | 0 | 202 | 2 | 3 | 69 | MFA5258231.1 malate dehydrogenase [Opitutales bacterium] | diamond | 1200 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 28770358 | 28770358 | PRJEB43370_P_NODE_8947_length_166_cov_0.888889_g8904_i0 | PRJEB43370 | 8947 | 166 | 0.888889 | 1.47555574 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 79.7 | 3.44e-16 | NR | MDB4508061.1 | 2562705 | g8904 | i0 | 58.2 | 1.96987951807229 | 55 | 23 | 99.4 | 0 | 2 | 166 | 73 | 127 | MDB4508061.1 endonuclease/exonuclease/phosphatase family protein [Akkermansiaceae bacterium] | diamond | 327 | 79.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;