RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJEB43370" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB43370 · 12 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7712644 7712644 PRJEB43370_P_NODE_9927_length_164_cov_0.904348_g9884_i0 PRJEB43370 9927 164 0.904348 1.48313072 root 1 Root_unresolved Root_unresolved 89.4 4.71e-19   NR CAF0754626.1 104777 g9884 i0 83.3 8.87195121951219 54 9 98.8 0 2 163 372 425 CAF0754626.1 unnamed protein product [Brachionus calyciflorus] diamond 1455 89.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
8987311 8987311 PRJEB43370_P_NODE_2848_length_257_cov_1.500000_g2805_i0 PRJEB43370 2848 257 1.5 3.855 Opisthokonta 33154 Rotifera other_Eukaryota 148 4.82e-44   NR RNA36257.1 10195 g2805 i0 79.8 49.0272373540856 84 17 98.1 0 257 6 47 130 RNA36257.1 40S ribosomal S15Aa [Brachionus plicatilis] diamond 12600 148 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
26748133 26748133 PRJEB43370_P_NODE_10261_length_163_cov_0.912281_g10218_i0 PRJEB43370 10261 163 0.912281 1.48701803 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 41.6 0.0332   NR CAF0971129.1 1234261 g10218 i0 50 0.736196319018405 40 17 73.6 1 159 40 571 607 CAF0971129.1 unnamed protein product [Didymodactylos carnosus] diamond 120 41.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
26805183 26805183 PRJEB43370_P_NODE_5281_length_197_cov_1.405405_g5238_i0 PRJEB43370 5281 197 1.405405 2.76864785 Metazoa 33208 Rotifera other_Eukaryota 55.1 8.87e-7   NR CAF0974315.1 1234261 g5238 i0 51.9 3.6243654822335 54 26 82.2 0 2 163 33 86 CAF0974315.1 unnamed protein product [Didymodactylos carnosus] diamond 714 55.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
27254618 27254618 PRJEB43370_P_NODE_10903_length_162_cov_0.920354_g10860_i0 PRJEB43370 10903 162 0.920354 1.49097348 Adineta steineri 433720 Rotifera other_Eukaryota 42 0.00652   NR CAF1114973.1 433720 g10860 i0 48.7 0.722222222222222 39 19 72.2 1 138 22 29 66 CAF1114973.1 unnamed protein product [Adineta steineri] diamond 117 42 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28517888 28517888 PRJEB43370_P_NODE_8987_length_166_cov_0.888889_g8944_i0 PRJEB43370 8987 166 0.888889 1.47555574 Adineta steineri 433720 Rotifera other_Eukaryota 75.1 5.16e-14   NR CAF3828868.1 433720 g8944 i0 60.4 5.45783132530121 53 21 95.8 0 2 160 620 672 CAF3828868.1 unnamed protein product [Adineta steineri] diamond 906 75.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
29212644 29212644 PRJEB43370_P_NODE_9809_length_164_cov_0.904348_g9766_i0 PRJEB43370 9809 164 0.904348 1.48313072 Adineta steineri 433720 Rotifera other_Eukaryota 42.7 0.0129   NR CAF1304515.1 433720 g9766 i0 46 0.914634146341463 50 25 87.8 1 161 18 347 396 CAF1304515.1 unnamed protein product [Adineta steineri] diamond 150 42.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
29307114 29307114 PRJEB43370_P_NODE_8749_length_166_cov_1.324786_g8706_i0 PRJEB43370 8749 166 1.324786 2.19914476 Adineta ricciae 249248 Rotifera other_Eukaryota 96.3 4.709999999999999e-23   NR CAF1066595.1 249248 g8706 i0 81.1 8.62048192771084 53 10 95.8 0 164 6 145 197 CAF1066595.1 unnamed protein product [Adineta ricciae] diamond 1431 96.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30222977 30222977 PRJEB43370_P_NODE_5112_length_200_cov_1.331126_g5069_i0 PRJEB43370 5112 200 1.331126 2.662252 Adineta vaga 104782 Rotifera other_Eukaryota 51.2 2.13e-5   NR UJR29021.1 104782 g5069 i0 45.3 0.96 64 31 96 1 5 196 194 253 UJR29021.1 hypothetical protein I4U23_010238 [Adineta vaga] diamond 192 51.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
30475937 30475937 PRJEB43370_P_NODE_9153_length_166_cov_0.888889_g9110_i0 PRJEB43370 9153 166 0.888889 1.47555574 Adineta steineri 433720 Rotifera other_Eukaryota 58.9 1.88e-8   NR CAF1264236.1 433720 g9110 i0 54.9 2.76506024096386 51 21 92.2 1 158 6 53 101 CAF1264236.1 unnamed protein product [Adineta steineri] diamond 459 58.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
30507443 30507443 PRJEB43370_P_NODE_3393_length_238_cov_1.058201_g3350_i0 PRJEB43370 3393 238 1.058201 2.51851838 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 125 9.66e-33   NR CAF0907420.1 104777 g3350 i0 78.1 0.920168067226891 73 16 92 0 20 238 129 201 CAF0907420.1 unnamed protein product [Brachionus calyciflorus] diamond 219 125 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32278252 32278252 PRJEB43370_P_NODE_4559_length_210_cov_1.291925_g4516_i0 PRJEB43370 4559 210 1.291925 2.7130425 Adineta steineri 433720 Rotifera other_Eukaryota 99.4 2.49e-24   NR CAF4132805.1 433720 g4516 i0 69 6.08571428571429 71 21 100 1 1 210 37 107 CAF4132805.1 unnamed protein product, partial [Adineta steineri] diamond 1278 99.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;