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contig_metadata

28 rows where bioproject = "PRJEB43370", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 28 ✖

tax_phylum 1

  • Myxococcota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJEB43370 · 28 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26780380 26780380 PRJEB43370_P_NODE_10901_length_162_cov_0.920354_g10858_i0 PRJEB43370 10901 162 0.920354 1.49097348 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 65.1 1.59e-10   NR MBI5501983.1 2026735 g10858 i0 62.8 2.44444444444444 43 16 79.6 0 140 12 85 127 MBI5501983.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 396 65.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27159605 27159605 PRJEB43370_P_NODE_8922_length_166_cov_0.888889_g8879_i0 PRJEB43370 8922 166 0.888889 1.47555574 Polyangiaceae bacterium 2268199 Bacteria Bacteria 83.2 6.67e-17   NR HLV65013.1 2268199 g8879 i0 63.6 1.98795180722892 55 20 99.4 0 1 165 138 192 HLV65013.1 aldehyde dehydrogenase family protein [Polyangiaceae bacterium] diamond 330 83.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27318097 27318097 PRJEB43370_P_NODE_5683_length_191_cov_1.408451_g5640_i0 PRJEB43370 5683 191 1.408451 2.69014141 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 40.8 0.0319   NR MBN2725149.1 2026735 g5640 i0 48.6 0.549738219895288 35 15 55 1 1 105 3 34 MBN2725149.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 105 40.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27381313 27381313 PRJEB43370_P_NODE_3723_length_228_cov_2.301676_g3680_i0 PRJEB43370 3723 228 2.301676 5.24782128 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.3 0.00866   NR MCC6993871.1 2026735 g3680 i0 41.1 2.57894736842105 56 31 71.1 2 63 224 377 432 MCC6993871.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 588 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27406293 27406293 PRJEB43370_P_NODE_3963_length_223_cov_0.896552_g3920_i0 PRJEB43370 3963 223 0.896552 1.99931096 Bacteria 2 Bacteria Bacteria 55.5 9.12e-7   NR HWN71616.1 2663208 g3920 i0 42.5 2.65022421524664 73 37 96.9 3 6 221 209 277 HWN71616.1 lysyl oxidase family protein [Haliangium sp.] diamond 591 55.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium sp.
27627249 27627249 PRJEB43370_P_NODE_3464_length_235_cov_2.231183_g3421_i0 PRJEB43370 3464 235 2.231183 5.24328005 Pseudomonadati 3379134 Bacteria Bacteria 54.3 2.91e-6   NR OQX70311.1 1970199 g3421 i0 61 6.20425531914894 41 15 51.1 1 213 94 1396 1436 OQX70311.1 MAG: hypothetical protein B6A08_00330 [Sorangiineae bacterium NIC37A_2] diamond 1458 54.7 0.992687385740402 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Sorangiineae bacterium NIC37A_2
27886287 27886287 PRJEB43370_P_NODE_1845_length_321_cov_2.415441_g1802_i0 PRJEB43370 1845 321 2.415441 7.75356561 Myxococcales bacterium 2026763 Bacteria Bacteria 55.8 2.08e-6   NR MBK9070054.1 2026763 g1802 i0 47.1 0.476635514018692 51 20 42.1 2 138 4 217 266 MBK9070054.1 PPC domain-containing protein [Myxococcales bacterium] diamond 153 55.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27942923 27942923 PRJEB43370_P_NODE_2165_length_295_cov_1.268293_g2122_i0 PRJEB43370 2165 295 1.268293 3.74146435 Myxococcia 32015 Bacteria Bacteria 49.3 3.63e-4   NR MCB9548328.1 2026763 g2122 i0 40.6 1.68813559322034 69 39 68.1 1 225 25 1584 1652 MCB9548328.1 hypothetical protein [Myxococcales bacterium] diamond 498 49.7 0.991951710261569 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28549604 28549604 PRJEB43370_P_NODE_9207_length_165_cov_1.387931_g9164_i0 PRJEB43370 9207 165 1.387931 2.29008615 Vulgatibacter incomptus 1391653 Bacteria Bacteria 47.8 2.15e-4   NR AKU92739.1 1391653 g9164 i0 53.8 3.09090909090909 39 15 70.9 1 42 158 26 61 AKU92739.1 hypothetical protein AKJ08_3126 [Vulgatibacter incomptus] diamond 510 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Vulgatibacteraceae Vulgatibacter Vulgatibacter incomptus
28770354 28770354 PRJEB43370_P_NODE_6087_length_186_cov_1.087591_g6044_i0 PRJEB43370 6087 186 1.087591 2.02291926 Bradymonadia bacterium 3121696 Bacteria Bacteria 47.8 3.13e-4   NR MFN3199957.1 3121696 g6044 i0 51.2 0.661290322580645 41 15 66.1 1 10 132 4396 4431 MFN3199957.1 thrombospondin type 3 repeat-containing protein [Bradymonadia bacterium] diamond 123 47.8 1 Bacteria   Pseudomonadati Myxococcota Bradymonadia       Bradymonadia bacterium
28833536 28833536 PRJEB43370_P_NODE_7768_length_169_cov_0.866667_g7725_i0 PRJEB43370 7768 169 0.866667 1.46466723 Myxococcales bacterium 2026763 Bacteria Bacteria 75.5 3.94e-14   NR MCB9638593.1 2026763 g7725 i0 67.9 0.994082840236686 56 18 99.4 0 2 169 366 421 MCB9638593.1 acetoacetate--CoA ligase [Myxococcales bacterium] diamond 168 75.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28928277 28928277 PRJEB43370_P_NODE_9868_length_164_cov_0.904348_g9825_i0 PRJEB43370 9868 164 0.904348 1.48313072 Myxococcales bacterium 2026763 Bacteria Bacteria 54.3 1.06e-6   NR MDO9017237.1 2026763 g9825 i0 56.3 1.84756097560976 48 21 87.8 0 161 18 771 818 MDO9017237.1 hypothetical protein [Myxococcales bacterium] diamond 303 54.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29275453 29275453 PRJEB43370_P_NODE_8309_length_167_cov_0.966102_g8266_i0 PRJEB43370 8309 167 0.966102 1.61339034 Myxococcales bacterium 2026763 Bacteria Bacteria 44.3 0.00308   NR MBL9099531.1 2026763 g8266 i0 40.7 0.970059880239521 54 32 97 0 165 4 47 100 MBL9099531.1 hypothetical protein [Myxococcales bacterium] diamond 162 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29654097 29654097 PRJEB43370_P_NODE_10550_length_162_cov_1.840708_g10507_i0 PRJEB43370 10550 162 1.840708 2.98194696 Polyangiales bacterium 3034171 Bacteria Bacteria 59.3 1.65e-8   NR MEZ4389728.1 3034171 g10507 i0 57.7 0.962962962962963 52 21 96.3 1 158 3 132 182 MEZ4389728.1 hypothetical protein [Polyangiales bacterium] diamond 156 59.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
30064951 30064951 PRJEB43370_P_NODE_8212_length_168_cov_0.873950_g8169_i0 PRJEB43370 8212 168 0.87395 1.468236 Myxococcales bacterium 2026763 Bacteria Bacteria 66.2 6.77e-11   NR MEB2284342.1 2026763 g8169 i0 59.3 4.69642857142857 54 20 92.9 1 3 158 390 443 MEB2284342.1 DUF4215 domain-containing protein [Myxococcales bacterium] diamond 789 66.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30311678 30311678 PRJEB43370_P_NODE_7052_length_173_cov_1.177419_g7009_i0 PRJEB43370 7052 173 1.177419 2.03693487 Pseudomonadati 3379134 Bacteria Bacteria 46.6 6.22e-4   NR MCH2107811.1 2268199 g7009 i0 43.2 1.42196531791908 44 25 76.3 0 166 35 48 91 MCH2107811.1 leishmanolysin [Polyangiaceae bacterium] diamond 246 47 0.991489361702128 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30318379 30318379 PRJEB43370_P_NODE_6572_length_179_cov_1.238462_g6529_i0 PRJEB43370 6572 179 1.238462 2.21684698 Kofleriaceae bacterium 2212474 Bacteria Bacteria 88.6 6.71e-19   NR HEY5934200.1 2212474 g6529 i0 66.1 0.988826815642458 59 20 98.9 0 179 3 203 261 HEY5934200.1 hypothetical protein [Kofleriaceae bacterium] diamond 177 88.6 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31392465 31392465 PRJEB43370_P_NODE_7936_length_168_cov_0.873950_g7893_i0 PRJEB43370 7936 168 0.87395 1.468236 Vulgatibacter sp. 1971226 Bacteria Bacteria 61.2 3.96e-9   NR WP_373046014.1 1971226 g7893 i0 51.9 1.91071428571429 52 21 85.7 2 157 14 511 562 WP_373046014.1 DUF4215 domain-containing protein [Vulgatibacter sp.] diamond 321 61.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Vulgatibacteraceae Vulgatibacter Vulgatibacter sp.
31512333 31512333 PRJEB43370_P_NODE_5536_length_193_cov_1.381944_g5493_i0 PRJEB43370 5536 193 1.381944 2.66715192 Chondromyces 50 Bacteria Bacteria 48.5 1.79e-4   NR WP_044250348.1 51 g5493 i0 35 2.48704663212435 60 30 93.3 1 184 5 718 768 WP_044250348.1 hypothetical protein [Chondromyces apiculatus] diamond 480 48.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces apiculatus
31550660 31550660 PRJEB43370_P_NODE_6716_length_177_cov_1.609375_g6673_i0 PRJEB43370 6716 177 1.609375 2.84859375 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 83.2 1.05e-18   NR MDA8405706.1 2026735 g6673 i0 69.1 0.932203389830508 55 14 88.1 1 161 6 15 69 MDA8405706.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Deltaproteobacteria bacterium] diamond 165 83.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31645171 31645171 PRJEB43370_P_NODE_9317_length_165_cov_0.896552_g9274_i0 PRJEB43370 9317 165 0.896552 1.4793108 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 61.2 3.13e-9   NR MBW1688487.1 2026735 g9274 i0 46.3 0.981818181818182 54 29 98.2 0 163 2 77 130 MBW1688487.1 SDR family oxidoreductase [Deltaproteobacteria bacterium] diamond 162 61.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31708563 31708563 PRJEB43370_P_NODE_9357_length_165_cov_0.896552_g9314_i0 PRJEB43370 9357 165 0.896552 1.4793108 Myxococcota bacterium 2818507 Bacteria Bacteria 43.9 0.00532   NR MBP7160088.1 2818507 g9314 i0 45.1 3.70909090909091 51 24 92.7 2 1 153 501 547 MBP7160088.1 hypothetical protein [Myxococcota bacterium] diamond 612 43.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32088191 32088191 PRJEB43370_P_NODE_4738_length_207_cov_0.987342_g4695_i0 PRJEB43370 4738 207 0.987342 2.04379794 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.9 0.00952   NR MBM4344213.1 2026735 g4695 i0 53.6 1 69 22 100 2 1 207 53 111 MBM4344213.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 207 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32271527 32271527 PRJEB43370_P_NODE_5958_length_187_cov_1.507246_g5915_i0 PRJEB43370 5958 187 1.507246 2.81855002 Myxococcia 32015 Bacteria Bacteria 78.6 3.36e-17   NR MCO4762647.1 2026763 g5915 i0 61.4 19.4117647058824 57 22 91.4 0 1 171 26 82 MCO4762647.1 RNA-binding protein [Myxococcales bacterium] diamond 3630 78.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32594459 32594459 PRJEB43370_P_NODE_8800_length_166_cov_0.888889_g8757_i0 PRJEB43370 8800 166 0.888889 1.47555574 Myxococcota bacterium 2818507 Bacteria Bacteria 49.3 6.55e-5   NR MEZ4266202.1 2818507 g8757 i0 50 0.795180722891566 44 20 79.5 1 23 154 1905 1946 MEZ4266202.1 EGF domain-containing protein [Myxococcota bacterium] diamond 132 49.3 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32656958 32656958 PRJEB43370_P_NODE_1720_length_335_cov_1.416084_g1677_i0 PRJEB43370 1720 335 1.416084 4.7438814 Kofleriaceae bacterium 2212474 Bacteria Bacteria 70.5 2.05e-11   NR HET9621954.1 2212474 g1677 i0 59.6 0.886567164179105 52 21 46.6 0 3 158 879 930 HET9621954.1 hypothetical protein [Kofleriaceae bacterium] diamond 297 70.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
32688648 32688648 PRJEB43370_P_NODE_3920_length_224_cov_0.891429_g3877_i0 PRJEB43370 3920 224 0.891429 1.99680096 Myxococcota bacterium 2818507 Bacteria Bacteria 96.7 1.11e-21   NR MFA6034219.1 2818507 g3877 i0 68.7 0.897321428571429 67 20 89.7 1 1 201 162 227 MFA6034219.1 hypothetical protein [Myxococcota bacterium] diamond 201 96.7 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32751752 32751752 PRJEB43370_P_NODE_5120_length_200_cov_1.099338_g5077_i0 PRJEB43370 5120 200 1.099338 2.198676 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 57 1.94e-7   NR MBN95682.1 2026735 g5077 i0 48.2 1.395 56 26 82.5 2 36 200 16 69 MBN95682.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 279 57 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;