RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB43370" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB43370 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32783069 32783069 PRJEB43370_P_NODE_4940_length_203_cov_1.350649_g4897_i0 PRJEB43370 4940 203 1.350649 2.74181747 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 80.9 8.01e-16   NR HEY2772621.1 2838779 g4897 i0 64.5 0.916256157635468 62 21 90.1 1 202 20 297 358 HEY2772621.1 DUF4215 domain-containing protein [Candidatus Binatia bacterium] diamond 186 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32877683 32877683 PRJEB43370_P_NODE_5260_length_197_cov_2.087838_g5217_i0 PRJEB43370 5260 197 2.087838 4.11304086 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 77.8 8.52e-15   NR GIW41541.1 2838779 g5217 i0 58.5 0.989847715736041 65 27 99 0 196 2 290 354 GIW41541.1 MAG: succinyl-diaminopimelate desuccinylase [Candidatus Binatia bacterium] diamond 195 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;