RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB43370" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJEB43370 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17911770 17911770 PRJEB43370_P_NODE_3675_length_229_cov_1.733333_g3632_i0 PRJEB43370 3675 229 1.733333 3.96933257 Deinococcus aquatilis 519440 Bacteria Bacteria 114 1.7000000000000002e-27   NR WP_019011035.1 519440 g3632 i0 77.6 5.94759825327511 76 17 99.6 0 1 228 296 371 WP_019011035.1 S8 family peptidase [Deinococcus aquatilis] diamond 1362 114 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aquatilis
29773992 29773992 PRJEB43370_P_NODE_4091_length_220_cov_0.894737_g4048_i0 PRJEB43370 4091 220 0.894737 1.9684214 PVC group 1783257 Bacteria Bacteria 111 1.5800000000000002e-27   NR WP_045087450.1 1006576 g4048 i0 67.1 13.8 73 24 99.5 0 2 220 114 186 WP_045087450.1 potassium channel beta subunit family protein [Defluviitoga tunisiensis] diamond 3036 111 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae Defluviitoga Defluviitoga tunisiensis
31582201 31582201 PRJEB43370_P_NODE_8276_length_167_cov_1.338983_g8233_i0 PRJEB43370 8276 167 1.338983 2.23610161 Synergistaceae bacterium 2053624 Bacteria Bacteria 48.5 4.77e-5   NR MBQ3402503.1 2053624 g8233 i0 60.5 1.45508982035928 38 15 68.3 0 140 27 69 106 MBQ3402503.1 NADAR family protein [Synergistaceae bacterium] diamond 243 48.5 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;