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contig_metadata

7 rows where bioproject = "PRJEB43370" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJEB43370 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26653328 26653328 PRJEB43370_P_NODE_6221_length_184_cov_1.259259_g6178_i0 PRJEB43370 6221 184 1.259259 2.31703656 Halonotius sp. J 2218529 Archaea Archaea 43.9 0.00667   NR ERH05107.1 1070774 g6178 i0 40.4 3.60326086956522 52 27 84.8 1 5 160 87 134 ERH05107.1 MAG: ABC-type transport system, periplasmic component/surface lipoprotein [Halonotius sp. J07HN4] diamond 663 43.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halonotius Halonotius sp. J07HN4
26994884 26994884 PRJEB43370_P_NODE_5462_length_194_cov_1.434483_g5419_i0 PRJEB43370 5462 194 1.434483 2.78289702 Methanobacteriati 3366610 Archaea Archaea 105 7.26e-26   NR MBH33411.1 2026739 g5419 i0 76.6 3.94329896907217 64 15 99 0 1 192 223 286 MBH33411.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 765 105 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27191388 27191388 PRJEB43370_P_NODE_5622_length_192_cov_1.090909_g5579_i0 PRJEB43370 5622 192 1.090909 2.09454528 Thermoplasmata archaeon 1906666 Archaea Archaea 45.4 0.00213   NR HKZ49298.1 1906666 g5579 i0 60.9 3.03125 46 16 71.9 2 53 190 1059 1102 HKZ49298.1 PKD domain-containing protein [Thermoplasmata archaeon] diamond 582 45.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27949539 27949539 PRJEB43370_P_NODE_4525_length_210_cov_6.267081_g4482_i0 PRJEB43370 4525 210 6.267081 13.1608701 Methanomassiliicoccales archaeon LGM-RCC1 3018355 Archaea Archaea 41.2 0.00996   NR WII08072.1 3018355 g4482 i0 73.1 0.371428571428571 26 7 37.1 0 190 113 24 49 WII08072.1 hypothetical protein PED39_02425 [Methanomassiliicoccales archaeon LGM-RCC1] diamond 78 41.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon LGM-RCC1
28201875 28201875 PRJEB43370_P_NODE_8166_length_168_cov_0.873950_g8123_i0 PRJEB43370 8166 168 0.87395 1.468236 Thermoplasmatota archaeon 2806419 Archaea Archaea 61.6 1.47e-9   NR MEE2759763.1 2806419 g8123 i0 68.3 1.46428571428571 41 13 73.2 0 44 166 1 41 MEE2759763.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Thermoplasmatota archaeon] diamond 246 61.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29773993 29773993 PRJEB43370_P_NODE_6031_length_186_cov_1.518248_g5988_i0 PRJEB43370 6031 186 1.518248 2.82394128 root 1 Root_unresolved Root_unresolved 56.6 1.52e-7   NR UCE38141.1 1906666 g5988 i0 42.4 3.85483870967742 59 34 95.2 0 5 181 106 164 UCE38141.1 MAG: MTAP family purine nucleoside phosphorylase [Thermoplasmata archaeon] diamond 717 56.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31455608 31455608 PRJEB43370_P_NODE_3236_length_242_cov_1.886010_g3193_i0 PRJEB43370 3236 242 1.88601 4.5641442 Methanocaldococcus villosus 667126 Archaea Archaea 56.2 1.41e-7   NR WP_004592618.1 667126 g3193 i0 40 0.991735537190083 80 31 99.2 2 242 3 78 140 WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus] diamond 240 56.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;