RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB43370", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB43370 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26906936 26906936 PRJEB43370_P_NODE_10882_length_162_cov_0.920354_g10839_i0 PRJEB43370 10882 162 0.920354 1.49097348 Rozella allomycis CSF55 988480 Fungi Fungi 80.1 8.21e-16   NR EPZ30926.1 988480 g10839 i0 67.9 5.83333333333333 53 17 98.1 0 2 160 247 299 EPZ30926.1 Peptidase S8/S53 domain-containing protein [Rozella allomycis CSF55] diamond 945 80.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27159600 27159600 PRJEB43370_P_NODE_3942_length_223_cov_1.195402_g3899_i0 PRJEB43370 3942 223 1.195402 2.66574646 Rozella allomycis CSF55 988480 Fungi Fungi 125 3.0899999999999993e-31   NR EPZ33761.1 988480 g3899 i0 82.2 5.89237668161435 73 13 98.2 0 223 5 243 315 EPZ33761.1 Aminotransferase, class I/classII domain-containing protein [Rozella allomycis CSF55] diamond 1314 125 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27539100 27539100 PRJEB43370_P_NODE_3424_length_237_cov_1.021277_g3381_i0 PRJEB43370 3424 237 1.021277 2.42042649 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 82.8 5.25e-17   NR PJF16614.1 1246581 g3381 i0 70.4 0.89873417721519 71 21 89.9 0 237 25 174 244 PJF16614.1 40S ribosomal protein S6 [Paramicrosporidium saccamoebae] diamond 213 82.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30563610 30563610 PRJEB43370_P_NODE_2253_length_288_cov_1.615063_g2210_i0 PRJEB43370 2253 288 1.615063 4.65138144 Eukaryota 2759 Fungi Fungi 124 4.749999999999999e-31   NR EPZ31343.1 988480 g2210 i0 57.3 6.01041666666667 96 41 100 0 1 288 197 292 EPZ31343.1 DUF1900 domain-containing protein [Rozella allomycis CSF55] diamond 1731 124 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30848318 30848318 PRJEB43370_P_NODE_4214_length_217_cov_0.928571_g4171_i0 PRJEB43370 4214 217 0.928571 2.01499907 Eukaryota 2759 Fungi Fungi 125 1.58e-33   NR EPZ33659.1 988480 g4171 i0 78.9 10.7972350230415 71 15 98.2 0 215 3 85 155 EPZ33659.1 60S ribosomal protein L8 [Rozella allomycis CSF55] diamond 2343 125 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32429668 32429668 PRJEB43370_P_NODE_3659_length_230_cov_0.845304_g3616_i0 PRJEB43370 3659 230 0.84530400000000006 1.9441992 Eukaryota 2759 Fungi Fungi 112 2.57e-28   NR PJF16614.1 1246581 g3616 i0 73.7 1.98260869565217 76 20 99.1 0 229 2 130 205 PJF16614.1 40S ribosomal protein S6 [Paramicrosporidium saccamoebae] diamond 456 113 0.991150442477876 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;