RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJEB43370", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 27 ✖

tax_clade 1

  • Sar · 27 ✖

bioproject 1

  • PRJEB43370 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
60250 60250 PRJEB43370_P_NODE_841_length_475_cov_2.845070_g798_i0 PRJEB43370 841 475 2.84507 13.5140825 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 161 1.95e-47   NR XP_028869867.1 462227 g798 i0 53.2 11.5010526315789 154 69 95.4 1 17 469 4 157 XP_028869867.1 Eukaryotic translation initiation factor 5A [Babesia sp. Xinjiang] diamond 5463 161 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
2610105 2610105 PRJEB43370_P_NODE_2683_length_264_cov_1.539535_g2640_i0 PRJEB43370 2683 264 1.539535 4.0643724 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 278 3.65e-70   NTclustered gi|1843568304|ref|XM_034563737.1| 5823 g2640 i0 85.714 153.037878787879 266 34 100 4 1 264 187 450 Plasmodium berghei ANKA polyubiquitin, putative (PBANKA_0610300), partial mRNA blastn 40402 278 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
3886276 3886276 PRJEB43370_P_NODE_10304_length_163_cov_0.912281_g10261_i0 PRJEB43370 10304 163 0.912281 1.48701803 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 110 7.95e-20   NTclustered gi|921131779|ref|XM_013584971.1| 51315 g10261 i0 85.714 4.04294478527607 105 13 64 2 42 145 275 172 Eimeria necatrix ribosomal protein L11, putative partial mRNA blastn 659 110 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
10262965 10262965 PRJEB43370_P_NODE_10309_length_163_cov_0.912281_g10266_i0 PRJEB43370 10309 163 0.912281 1.48701803 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 91.3 1.02e-19   NR CDI74160.1 51316 g10266 i0 75 3.82822085889571 52 13 95.7 0 157 2 704 755 CDI74160.1 Cytoplasmic aconitate hydratase, related [Eimeria praecox] diamond 624 91.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
10262967 10262967 PRJEB43370_P_NODE_10489_length_163_cov_0.912281_g10446_i0 PRJEB43370 10489 163 0.912281 1.48701803 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.014   NTclustered gi|916502172|ref|XM_013496445.1| 44415 g10446 i0 100 0.171779141104294 28 0 17 0 45 72 2533 2506 Eimeria mitis Retrotransposon nucleocapsid protein, related (EMH_0048750), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
22666823 22666823 PRJEB43370_P_NODE_3678_length_229_cov_1.683333_g3635_i0 PRJEB43370 3678 229 1.683333 3.85483257 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 198 2.48e-46   NTclustered gi|1270520602|ref|XM_022956109.1| 5861 g3635 i0 86.264 49.235807860262 182 25 79 0 4 185 182 1 Plasmodium yoelii histone H4, putative (PY17X_0944400), partial mRNA blastn 11275 198 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
24286045 24286045 PRJEB43370_P_NODE_800_length_488_cov_3.353075_g757_i0 PRJEB43370 800 488 3.353075 16.363006 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 243 2.63e-59   NTclustered gi|82704923|ref|XM_721661.1| 5861 g757 i0 76.782 6.17008196721311 435 99 89 2 55 488 51 484 Plasmodium yoelii heat shock protein 70, putative (PY17X_0712100), partial mRNA blastn 3011 243 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
26646678 26646678 PRJEB43370_P_NODE_6421_length_181_cov_1.575758_g6378_i0 PRJEB43370 6421 181 1.575758 2.85212198 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 94.4 7.55e-23   NR GFE53273.1 5869 g6378 i0 78.9 10.475138121547 57 12 94.5 0 11 181 1 57 GFE53273.1 60S ribosomal protein L27a-3-like [Babesia ovis] diamond 1896 95.1 0.992639327024185 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
27311502 27311502 PRJEB43370_P_NODE_7543_length_169_cov_0.866667_g7500_i0 PRJEB43370 7543 169 0.866667 1.46466723 root 1 Root_unresolved Root_unresolved 89 7.2e-19   NR XP_029219106.1 94643 g7500 i0 81.5 4.8284023668639096 54 10 95.9 0 2 163 760 813 XP_029219106.1 aconitate hydratase ACN/IRP [Besnoitia besnoiti] diamond 816 89 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
27437889 27437889 PRJEB43370_P_NODE_10583_length_162_cov_1.654867_g10540_i0 PRJEB43370 10583 162 1.654867 2.68088454 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 73.2 2.45e-14   NR XP_067926888.1 483139 g10540 i0 58.5 4.90740740740741 53 22 98.1 0 160 2 4 56 XP_067926888.1 u3 small nucleolar ribonucleoprotein [Cystoisospora suis] diamond 795 73.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
27595662 27595662 PRJEB43370_P_NODE_8184_length_168_cov_0.873950_g8141_i0 PRJEB43370 8184 168 0.87395 1.468236 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 53.9 1.51e-6   NR XP_011130218.1 110365 g8141 i0 55.8 5.41071428571429 52 23 92.9 0 5 160 638 689 XP_011130218.1 endonuclease/exonuclease/phosphatase family protein [Gregarina niphandrodes] diamond 909 54.3 0.992633517495396 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
28170500 28170500 PRJEB43370_P_NODE_3606_length_231_cov_1.428571_g3563_i0 PRJEB43370 3606 231 1.428571 3.29999901 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 59.7 6.03e-9   NR XP_021338074.1 1133968 g3563 i0 67.5 7.20779220779221 40 13 51.9 0 2 121 105 144 XP_021338074.1 small subunit ribosomal protein S18e [Babesia microti strain RI] diamond 1665 59.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
28486267 28486267 PRJEB43370_P_NODE_3987_length_222_cov_1.202312_g3944_i0 PRJEB43370 3987 222 1.202312 2.66913264 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 88.2 6.820000000000001e-21   NR XP_067803900.1 323732 g3944 i0 56.7 0.905405405405405 67 29 90.5 0 12 212 9 75 XP_067803900.1 bifunctional Acyl-CoA-binding protein [Babesia duncani] diamond 201 88.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
28858376 28858376 PRJEB43370_P_NODE_9608_length_165_cov_0.896552_g9565_i0 PRJEB43370 9608 165 0.896552 1.4793108 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.00697   NR KAF4638222.1 5811 g9565 i0 57.6 4.4 33 14 60 0 100 2 1007 1039 KAF4638222.1 putative cation-transporting ATPase [Toxoplasma gondii] diamond 726 43.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
29054740 29054740 PRJEB43370_P_NODE_4588_length_209_cov_3.250000_g4545_i0 PRJEB43370 4588 209 3.25 6.7925 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 81.3 2.63e-16   NR XP_013228068.1 5802 g4545 i0 53 1.89473684210526 66 31 94.7 0 201 4 154 219 XP_013228068.1 60S ribosomal protein L5 [Eimeria tenella] diamond 396 81.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
29932250 29932250 PRJEB43370_P_NODE_3971_length_222_cov_2.248555_g3928_i0 PRJEB43370 3971 222 2.248555 4.9917921 Theileria 5873 SAR_Eukaryotes SAR_Eukaryotes 89.4 1.04e-18   NR UKJ88721.2 68886 g3928 i0 69.6 3.02702702702703 56 17 75.7 0 218 51 19 74 UKJ88721.2 hypothetical protein MACJ_001966 [Theileria orientalis] diamond 672 90.1 0.992230854605993 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
29938809 29938809 PRJEB43370_P_NODE_3311_length_240_cov_1.900524_g3268_i0 PRJEB43370 3311 240 1.900524 4.5612576 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 127 1.12e-33   NR XP_029215426.1 94643 g3268 i0 73 0.925 74 20 92.5 0 18 239 14 87 XP_029215426.1 putative phosphate carrier [Besnoitia besnoiti] diamond 222 127 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
30096534 30096534 PRJEB43370_P_NODE_4032_length_221_cov_0.906977_g3989_i0 PRJEB43370 4032 221 0.906977 2.00441917 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 63.9 9.08e-10   NR XP_003879989.1 572307 g3989 i0 50 0.705882352941177 52 26 70.6 0 6 161 135 186 XP_003879989.1 cathepsin L, related [Neospora caninum Liverpool] diamond 156 63.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
30191336 30191336 PRJEB43370_P_NODE_6272_length_183_cov_1.552239_g6229_i0 PRJEB43370 6272 183 1.552239 2.84059737 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 62 2.82e-10   NR VWU49868.1 2600580 g6229 i0 51.7 0.983606557377049 60 26 93.4 1 178 8 70 129 VWU49868.1 40S ribosomal protein S10, putative [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 180 62 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles
30406325 30406325 PRJEB43370_P_NODE_1873_length_317_cov_3.022388_g1830_i0 PRJEB43370 1873 317 3.022388 9.58096996 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 110 6.14e-29   NR GFE54039.1 5869 g1830 i0 56.2 8.75394321766561 105 44 98.4 2 313 2 1 104 GFE54039.1 60S ribosomal protein L31 [Babesia ovis] diamond 2775 110 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
30538985 30538985 PRJEB43370_P_NODE_9593_length_165_cov_0.896552_g9550_i0 PRJEB43370 9593 165 0.896552 1.4793108 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 41.6 0.033   NR XP_012767295.1 5866 g9550 i0 39 0.745454545454545 41 25 74.5 0 27 149 39 79 XP_012767295.1 cyclin, N-terminal domain containing protein, putative [Babesia bigemina] diamond 123 41.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
30690207 30690207 PRJEB43370_P_NODE_2653_length_266_cov_0.958525_g2610_i0 PRJEB43370 2653 266 0.958525 2.5496765 Plasmodiidae 1639119 SAR_Eukaryotes SAR_Eukaryotes 144 9.29e-38   NR SBS86654.1 864141 g2610 i0 73.9 7.93984962406015 88 23 99.2 0 3 266 324 411 SBS86654.1 elongation factor 2, putative (eEF2) [Plasmodium ovale curtisi] diamond 2112 144 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
31044881 31044881 PRJEB43370_P_NODE_875_length_465_cov_3.286058_g832_i0 PRJEB43370 875 465 3.286058 15.2801697 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 196 2.31e-60   NR OEH76901.1 88456 g832 i0 70.1 2.74838709677419 144 43 92.9 0 2 433 30 173 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 1278 196 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31138967 31138967 PRJEB43370_P_NODE_10515_length_163_cov_0.912281_g10472_i0 PRJEB43370 10515 163 0.912281 1.48701803 Cryptosporidium hominis TU5 237895 SAR_Eukaryotes SAR_Eukaryotes 81.3 3.22e-16   NR XP_668342.1 353151 g10472 i0 66 7.78527607361963 53 18 97.5 0 161 3 300 352 XP_668342.1 glycogen phosphorylase 1 [Cryptosporidium hominis TU502] diamond 1269 81.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
32246770 32246770 PRJEB43370_P_NODE_8298_length_167_cov_1.322034_g8255_i0 PRJEB43370 8298 167 1.322034 2.20779678 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0083   NR XP_026194301.1 88456 g8255 i0 55.9 4.76047904191617 34 14 59.3 1 2 100 102 135 XP_026194301.1 uncharacterized protein OsI_027940 [Cyclospora cayetanensis] diamond 795 43.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
32625704 32625704 PRJEB43370_P_NODE_6080_length_186_cov_1.138686_g6037_i0 PRJEB43370 6080 186 1.138686 2.11795596 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 87.8 1.57e-18   NR VWU50564.1 2600580 g6037 i0 70 3.90322580645161 60 18 96.8 0 186 7 288 347 VWU50564.1 S-adenosylmethionine synthetase, putative [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 726 87.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles
32814708 32814708 PRJEB43370_P_NODE_5480_length_194_cov_1.400000_g5437_i0 PRJEB43370 5480 194 1.4 2.716 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 93.6 8.9e-21   NR XP_067197486.1 515981 g5437 i0 71.4 5.92268041237113 63 18 97.4 0 1 189 148 210 XP_067197486.1 fructose-1 [Cryptosporidium ryanae] diamond 1149 93.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;