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contig_metadata

36 rows where bioproject = "PRJEB43370", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 36 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 36 ✖

bioproject 1

  • PRJEB43370 · 36 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
60253 60253 PRJEB43370_P_NODE_921_length_453_cov_1.928218_g878_i0 PRJEB43370 921 453 1.928218 8.73482754 Metazoa 33208 Nematoda Nematoda 265 2.56e-79   NR VBB30983.1 6277 g878 i0 80.7 57.6291390728477 150 29 99.3 0 452 3 696 845 VBB30983.1 unnamed protein product [Acanthocheilonema viteae] diamond 26106 265 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
5162509 5162509 PRJEB43370_P_NODE_2865_length_256_cov_1.946860_g2822_i0 PRJEB43370 2865 256 1.94686 4.9839616 Tylopharynx sp. WEM-2009 669147 Nematoda Nematoda 135 2.25e-27   NTclustered gi|256709231|gb|GQ422268.1| 669147 g2822 i0 80.769 2.91796875 182 28 69 5 47 223 10 189 Tylopharynx sp. WEM-2009 small subunit ribosomal protein 28 (rps-28) mRNA, partial cds blastn 747 135 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Tylopharyngidae Tylopharynx Tylopharynx sp. WEM-2009
5162574 5162574 PRJEB43370_P_NODE_9825_length_164_cov_0.904348_g9782_i0 PRJEB43370 9825 164 0.904348 1.48313072 Pristionchus pauli 376545 Nematoda Nematoda 110 8.01e-20   NTclustered gi|150982019|gb|EF634598.1| 376545 g9782 i0 93.243 1.4390243902439 74 5 45 0 55 128 110 37 Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 236 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pauli
10262969 10262969 PRJEB43370_P_NODE_1069_length_420_cov_3.431267_g1026_i0 PRJEB43370 1069 420 3.431267 14.4113214 Strongyloides ratti 34506 Nematoda Nematoda 159 3.1599999999999995e-42   NR XP_024505069.1 34506 g1026 i0 55.9 10.6928571428571 136 57 95 1 408 10 588 723 XP_024505069.1 Large subunit GTPase 1 homolog [Strongyloides ratti] diamond 4491 159 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
11193301 11193301 PRJEB43370_P_NODE_2449_length_276_cov_1.731278_g2406_i0 PRJEB43370 2449 276 1.731278 4.77832728 Strongyloides 6247 Nematoda Nematoda 228 3.9299999999999985e-55   NTclustered gi|199600273|tpg|BK006066.1| 6248 g2406 i0 81.522 82.213768115942 276 51 100 0 1 276 1077 802 TPA_inf: Strongyloides stercoralis eukaryotic translation elongation factor 1A (eft-2) mRNA, complete cds blastn 22691 228 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides stercoralis
13743406 13743406 PRJEB43370_P_NODE_1131_length_410_cov_2.041551_g1088_i0 PRJEB43370 1131 410 2.041551 8.3703591 Trichuris trichiura 36087 Nematoda Nematoda 184 4.5999999999999995e-57   NR CDW60131.1 36087 g1088 i0 63.2 3.89268292682927 133 49 97.3 0 12 410 1 133 CDW60131.1 60S ribosomal protein L27a [Trichuris trichiura] diamond 1596 184 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
16636985 16636985 PRJEB43370_P_NODE_2754_length_261_cov_0.981132_g2711_i0 PRJEB43370 2754 261 0.981132 2.56075452 Strongyloides ratti 34506 Nematoda Nematoda 185 2.2499999999999994e-42   NTclustered gi|1376154049|ref|XM_024646386.1| 34506 g2711 i0 80.408 13.0574712643678 245 46 93 2 16 259 316 559 Strongyloides ratti V-type proton ATPase subunit B, kidney (SRAE_X000121000), partial mRNA blastn 3408 185 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
17911795 17911795 PRJEB43370_P_NODE_6755_length_177_cov_1.101562_g6712_i0 PRJEB43370 6755 177 1.101562 1.94976474 Aphelenchoides avenae 70226 Nematoda Nematoda 93.2 2.03e-21   NR KAH7715617.1 70226 g6712 i0 77.8 4.6271186440678 54 12 91.5 0 163 2 1 54 KAH7715617.1 40S ribosomal protein S6 [Aphelenchoides avenae] diamond 819 93.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
19185754 19185754 PRJEB43370_P_NODE_9576_length_165_cov_0.896552_g9533_i0 PRJEB43370 9576 165 0.896552 1.4793108 Rhabditida 6236 Nematoda Nematoda 95.1 4.51e-21   NR VDM47917.1 6265 g9533 i0 83.3 227.709090909091 54 9 98.2 0 164 3 363 416 VDM47917.1 unnamed protein product [Toxocara canis] diamond 37572 95.5 0.995811518324607 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
21392026 21392026 PRJEB43370_P_NODE_697_length_520_cov_2.218684_g655_i0 PRJEB43370 697 520 2.218684 11.5371568 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 185 1.37e-53   NR KAI3413796.1 36090 g655 i0 61.2 31.6038461538462 152 58 87.1 1 5 457 254 405 KAI3413796.1 translation elongation factor 2 [Globodera pallida] diamond 16434 186 0.99462365591397806 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
21736929 21736929 PRJEB43370_P_NODE_7898_length_168_cov_0.873950_g7855_i0 PRJEB43370 7898 168 0.87395 1.468236 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92.4 3.45e-20   NR CDJ88889.1 6289 g7855 i0 76.8 9.78571428571429 56 13 100 0 1 168 246 301 CDJ88889.1 Proteinase inhibitor I25 and Proteinase inhibitor I29 and Peptidase C1A domain containing protein [Haemonchus contortus] diamond 1644 93.2 0.991416309012876 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
22666819 22666819 PRJEB43370_P_NODE_1998_length_308_cov_1.378378_g1955_i0 PRJEB43370 1998 308 1.378378 4.24540424 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 370 6.99e-98   NTclustered gi|268619129|gb|GU130148.1| 6326 g1955 i0 88.312 101.850649350649 308 36 100 0 1 308 875 568 Bursaphelenchus xylophilus actin-4 mRNA, complete cds blastn 31370 370 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
23012159 23012159 PRJEB43370_P_NODE_3319_length_240_cov_1.361257_g3276_i0 PRJEB43370 3319 240 1.361257 3.2670168 Acrostichus rhynchophori 1538711 Nematoda Nematoda 139 1.61e-28   NTclustered gi|675118829|gb|KJ877294.1| 1538711 g3276 i0 82.803 3.09583333333333 157 25 65 2 24 179 198 43 Acrostichus rhynchophori strain RGD193 large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds blastn 743 139 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Acrostichus Acrostichus rhynchophori
25216039 25216039 PRJEB43370_P_NODE_10000_length_164_cov_0.904348_g9957_i0 PRJEB43370 10000 164 0.904348 1.48313072 Trichuris suis 68888 Nematoda Nematoda 92.8 2.47e-20   NR KFD54923.1 68888 g9957 i0 77.4 0.969512195121951 53 12 97 0 2 160 351 403 KFD54923.1 hypothetical protein M513_04105 [Trichuris suis] diamond 159 92.8 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
26678344 26678344 PRJEB43370_P_NODE_8241_length_167_cov_1.762712_g8198_i0 PRJEB43370 8241 167 1.762712 2.94372904 Metazoa 33208 Nematoda Nematoda 80.5 6.54e-16   NR VDN60483.1 318479 g8198 i0 66.7 2.91017964071856 54 18 97 0 167 6 184 237 VDN60483.1 unnamed protein product [Dracunculus medinensis] diamond 486 80.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
26678345 26678345 PRJEB43370_P_NODE_8461_length_167_cov_0.881356_g8418_i0 PRJEB43370 8461 167 0.881356 1.47186452 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.6 9.78e-21   NR WKX89126.1 27835 g8418 i0 75.9 4.7065868263473 54 13 97 0 5 166 345 398 WKX89126.1 hypothetical protein Q1695_008628 [Nippostrongylus brasiliensis] diamond 786 93.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Nippostrongylus Nippostrongylus brasiliensis
26837077 26837077 PRJEB43370_P_NODE_6321_length_182_cov_2.345865_g6278_i0 PRJEB43370 6321 182 2.345865 4.2694743 Metazoa 33208 Nematoda Nematoda 84.7 5.05e-19   NR TKR92981.1 34508 g6278 i0 69 17.2417582417582 58 18 95.6 0 8 181 29 86 TKR92981.1 hypothetical protein L596_007523 [Steinernema carpocapsae] diamond 3138 85.5 0.990643274853801 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
26938389 26938389 PRJEB43370_P_NODE_8582_length_167_cov_0.881356_g8539_i0 PRJEB43370 8582 167 0.881356 1.47186452 Brugia pahangi 6280 Nematoda Nematoda 75.9 2.73e-14   NR VDN93748.1 6280 g8539 i0 58.2 0.988023952095808 55 23 98.8 0 167 3 361 415 VDN93748.1 unnamed protein product [Brugia pahangi] diamond 165 75.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia pahangi
27570564 27570564 PRJEB43370_P_NODE_6644_length_178_cov_1.403101_g6601_i0 PRJEB43370 6644 178 1.403101 2.49751978 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 42 0.0172   NR CAD6187414.1 2777116 g6601 i0 56.4 1.02808988764045 39 17 65.7 0 14 130 19 57 CAD6187414.1 unnamed protein product [Caenorhabditis auriculariae] diamond 183 42 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
27602357 27602357 PRJEB43370_P_NODE_6444_length_181_cov_1.181818_g6401_i0 PRJEB43370 6444 181 1.181818 2.13909058 Meloidogyne enterolobii 390850 Nematoda Nematoda 47.4 3.82e-4   NR CAD2164178.1 390850 g6401 i0 43.5 2.05524861878453 62 32 97.8 1 4 180 21 82 CAD2164178.1 unnamed protein product [Meloidogyne enterolobii] diamond 372 47.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
27974399 27974399 PRJEB43370_P_NODE_7825_length_168_cov_1.470588_g7782_i0 PRJEB43370 7825 168 1.470588 2.47058784 Metazoa 33208 Nematoda Nematoda 69.7 4.09e-12   NR RCN29866.1 29170 g7782 i0 54.7 13.2321428571429 53 24 94.6 0 5 163 547 599 RCN29866.1 phage uncharacterized protein [Ancylostoma caninum] diamond 2223 69.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
28012828 28012828 PRJEB43370_P_NODE_9985_length_164_cov_0.904348_g9942_i0 PRJEB43370 9985 164 0.904348 1.48313072 Diploscapter pachys 2018661 Nematoda Nematoda 51.2 3.1e-6   NR PAV69430.1 2018661 g9942 i0 56.4 2.61585365853659 55 23 98.8 1 162 1 10 64 PAV69430.1 hypothetical protein WR25_09036 [Diploscapter pachys] diamond 429 51.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28163913 28163913 PRJEB43370_P_NODE_3605_length_231_cov_1.472527_g3562_i0 PRJEB43370 3605 231 1.472527 3.40153737 Opisthokonta 33154 Nematoda Nematoda 51.6 3.43e-6   NR VDK28727.1 6269 g3562 i0 50 2.50649350649351 48 24 62.3 0 85 228 31 78 VDK28727.1 unnamed protein product [Anisakis simplex] diamond 579 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
28612580 28612580 PRJEB43370_P_NODE_10947_length_162_cov_0.920354_g10904_i0 PRJEB43370 10947 162 0.920354 1.49097348 Pristionchus pacificus 54126 Nematoda Nematoda 49.7 4.33e-5   NR KAF8359393.1 54126 g10904 i0 47.2 0.981481481481482 53 27 98.1 1 3 161 78 129 KAF8359393.1 algn-1, partial [Pristionchus pacificus] diamond 159 49.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
29489791 29489791 PRJEB43370_P_NODE_4810_length_205_cov_1.923077_g4767_i0 PRJEB43370 4810 205 1.923077 3.94230785 Trichinella 6333 Nematoda Nematoda 42 0.0436   NR KRX97068.1 6337 g4767 i0 36.5 2.28292682926829 52 33 76.1 0 10 165 25 76 KRX97068.1 Epidermal growth factor receptor substrate 15-like 1, partial [Trichinella pseudospiralis] diamond 468 42.4 0.990566037735849 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
29521500 29521500 PRJEB43370_P_NODE_10650_length_162_cov_0.920354_g10607_i0 PRJEB43370 10650 162 0.920354 1.49097348 Metazoa 33208 Nematoda Nematoda 48.9 7.95e-5   NR XP_020301985.1 7209 g10607 i0 50.9 6.87037037037037 53 23 98.1 2 161 3 67 116 XP_020301985.1 hypothetical protein LOAG_08902 [Loa loa] diamond 1113 49.3 0.991886409736308 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
29679059 29679059 PRJEB43370_P_NODE_3130_length_246_cov_1.847716_g3087_i0 PRJEB43370 3130 246 1.847716 4.54538136 Opisthokonta 33154 Nematoda Nematoda 52.8 3.67e-6   NR TKR72806.1 34508 g3087 i0 43.1 3.75609756097561 51 29 62.2 0 1 153 103 153 TKR72806.1 hypothetical protein L596_020204 [Steinernema carpocapsae] diamond 924 53.1 0.994350282485876 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
30089871 30089871 PRJEB43370_P_NODE_10052_length_164_cov_0.904348_g10009_i0 PRJEB43370 10052 164 0.904348 1.48313072 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42.7 0.0128   NR VDD93659.1 51028 g10009 i0 63.6 2.15853658536585 33 12 60.4 0 5 103 45 77 VDD93659.1 unnamed protein product [Enterobius vermicularis] diamond 354 43.1 0.990719257540603 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
31044878 31044878 PRJEB43370_P_NODE_7075_length_172_cov_1.715447_g7032_i0 PRJEB43370 7075 172 1.715447 2.95056884 Steinernema carpocapsae 34508 Nematoda Nematoda 55.1 2.94e-7   NR TKR94882.1 34508 g7032 i0 61 0.715116279069767 41 16 71.5 0 169 47 143 183 TKR94882.1 hypothetical protein L596_009114 [Steinernema carpocapsae] diamond 123 55.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
31170662 31170662 PRJEB43370_P_NODE_11015_length_162_cov_0.920354_g10972_i0 PRJEB43370 11015 162 0.920354 1.49097348 Anisakis simplex 6269 Nematoda Nematoda 74.7 6.56e-14   NR VDK53946.1 6269 g10972 i0 66.7 2.98148148148148 54 17 100 1 1 162 289 341 VDK53946.1 unnamed protein product [Anisakis simplex] diamond 483 74.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
31195443 31195443 PRJEB43370_P_NODE_5175_length_199_cov_1.300000_g5132_i0 PRJEB43370 5175 199 1.3 2.587 Opisthokonta 33154 Nematoda Nematoda 103 2.52e-25   NR VDK51956.1 6269 g5132 i0 73.8 25.4170854271357 65 17 98 0 3 197 2 66 VDK51956.1 unnamed protein product [Anisakis simplex] diamond 5058 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
32081457 32081457 PRJEB43370_P_NODE_2718_length_263_cov_0.971963_g2675_i0 PRJEB43370 2718 263 0.971963 2.55626269 Metazoa 33208 Nematoda Nematoda 124 5.5e-34   NR VDN89219.1 6280 g2675 i0 71.1 13.2661596958175 83 24 94.7 0 251 3 53 135 VDN89219.1 unnamed protein product [Brugia pahangi] diamond 3489 125 0.992 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia pahangi
32081463 32081463 PRJEB43370_P_NODE_8618_length_167_cov_0.881356_g8575_i0 PRJEB43370 8618 167 0.881356 1.47186452 Rhabditida 6236 Nematoda Nematoda 57.8 6.64e-8   NR VDK64834.1 42157 g8575 i0 52.8 7.61676646706587 53 25 95.2 0 2 160 841 893 VDK64834.1 unnamed protein product [Onchocerca ochengi] diamond 1272 57.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Onchocerca Onchocerca ochengi
32587880 32587880 PRJEB43370_P_NODE_2779_length_260_cov_1.232227_g2736_i0 PRJEB43370 2779 260 1.232227 3.2037902 Opisthokonta 33154 Nematoda Nematoda 46.6 8.15e-4   NR KAH7668072.1 70226 g2736 i0 36.9 2.15769230769231 65 41 75 0 63 257 20 84 KAH7668072.1 CBN-UBL-1 protein [Aphelenchoides avenae] diamond 561 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
32587882 32587882 PRJEB43370_P_NODE_5579_length_192_cov_2.181818_g5536_i0 PRJEB43370 5579 192 2.181818 4.18909056 Opisthokonta 33154 Nematoda Nematoda 90.5 7.52e-20   NR CDJ95608.1 6289 g5536 i0 66.1 21.296875 59 19 92.2 1 177 1 3 60 CDJ95608.1 Ribosomal protein L37e domain containing protein [Haemonchus contortus] diamond 4089 90.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
32839454 32839454 PRJEB43370_P_NODE_6260_length_183_cov_1.552239_g6217_i0 PRJEB43370 6260 183 1.552239 2.84059737 Trichuris 36086 Nematoda Nematoda 117 5.2300000000000005e-33   NR CDW60316.1 36087 g6217 i0 86.7 17.7540983606557 60 8 98.4 0 1 180 4 63 CDW60316.1 Ribosomal protein L37 [Trichuris trichiura] diamond 3249 117 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;