RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB43370", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB43370 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28707366 28707366 PRJEB43370_P_NODE_2787_length_259_cov_3.280952_g2744_i0 PRJEB43370 2787 259 3.280952 8.49766568 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 79 1e-16   NR KAJ4453711.1 342808 g2744 i0 53.8 1.49420849420849 65 29 75.3 1 233 39 2 65 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 387 79 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29433150 29433150 PRJEB43370_P_NODE_4270_length_216_cov_0.976048_g4227_i0 PRJEB43370 4270 216 0.976048 2.10826368 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 59.7 2.12e-9   NR KAJ4453711.1 342808 g4227 i0 50 2.52777777777778 58 26 80.6 1 2 175 18 72 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 546 59.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;