RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB43370", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB43370 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11538441 11538441 PRJEB43370_P_NODE_7530_length_169_cov_0.866667_g7487_i0 PRJEB43370 7530 169 0.866667 1.46466723 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.2 9.83e-22   NR AAC33578.1 5722 g7487 i0 64.3 15.8520710059172 56 20 99.4 0 168 1 41 96 AAC33578.1 cytosolic heat shock protein 70, partial [Trichomonas vaginalis] diamond 2679 93.6 0.995726495726496 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32531370 32531370 PRJEB43370_P_NODE_819_length_482_cov_3.473441_g776_i0 PRJEB43370 819 482 3.473441 16.74198562 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 189 6.51e-58   NR XP_068360038.1 1144522 g776 i0 60.1 2.91286307053942 153 61 95.2 0 459 1 5 157 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 1404 189 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;