RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB41113", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB41113 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29875593 29875593 PRJEB41113_S_NODE_2731_length_212_cov_1.714286_g2722_i0 PRJEB41113 2731 212 1.714286 3.63428632 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 131 5.33e-37   NR MCJ7636773.1 2169593 g2722 i0 100 2.54716981132075 60 0 84.9 0 33 212 48 107 MCJ7636773.1 NADH-quinone oxidoreductase subunit I [Nitrososphaeraceae archaeon] diamond 540 131 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31613665 31613665 PRJEB41113_S_NODE_9476_length_162_cov_1.032000_g9467_i0 PRJEB41113 9476 162 1.032 1.67184 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 48.5 1.02e-5   NR MDW0242599.1 2169593 g9467 i0 95 0.740740740740741 20 1 37 0 160 101 55 74 MDW0242599.1 4Fe-4S binding protein [Nitrososphaeraceae archaeon] diamond 120 48.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;