contig_metadata
5 rows where bioproject = "PRJEB41113", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8986225 | 8986225 | PRJEB41113_S_NODE_1528_length_240_cov_2.630542_g1519_i0 | PRJEB41113 | 1528 | 240 | 2.630542 | 6.3133008 | Campylobacter concisus | 199 | Bacteria | Bacteria | 403 | 5.17e-108 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g1519 | i0 | 97.071 | 17.9041666666667 | 239 | 7 | 99 | 0 | 2 | 240 | 485870 | 486108 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 4297 | 403 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 17910704 | 17910704 | PRJEB41113_S_NODE_5315_length_185_cov_4.074324_g5306_i0 | PRJEB41113 | 5315 | 185 | 4.074324 | 7.5374994 | Malaciobacter marinus | 505249 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|1474785413|gb|CP032101.1| | 505249 | g5306 | i0 | 100 | 0.151351351351351 | 28 | 0 | 15 | 0 | 85 | 112 | 1771318 | 1771291 | Malaciobacter marinus strain JCM 15502 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter marinus | ||
| 26685135 | 26685135 | PRJEB41113_S_NODE_2241_length_221_cov_5.722826_g2232_i0 | PRJEB41113 | 2241 | 221 | 5.722826 | 12.64744546 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42 | 0.00772 | NR | GAA9192772.1 | 210 | g2232 | i0 | 85 | 0.271493212669683 | 20 | 3 | 27.1 | 0 | 69 | 128 | 2 | 21 | GAA9192772.1 hypothetical protein Kyoto193A_3750 [Helicobacter pylori] | diamond | 60 | 42 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30286655 | 30286655 | PRJEB41113_S_NODE_5392_length_185_cov_1.148649_g5383_i0 | PRJEB41113 | 5392 | 185 | 1.148649 | 2.12500065 | Helicobacter pylori | 210 | Bacteria | Bacteria | 57 | 1.39e-8 | NR | GAA9128289.1 | 210 | g5383 | i0 | 75 | 0.583783783783784 | 36 | 9 | 58.4 | 0 | 165 | 58 | 53 | 88 | GAA9128289.1 hypothetical protein Kyoto190A_1620 [Helicobacter pylori] | diamond | 108 | 57 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32625688 | 32625688 | PRJEB41113_S_NODE_9240_length_162_cov_35.472000_g9231_i0 | PRJEB41113 | 9240 | 162 | 35.472 | 57.46464 | Helicobacter pylori | 210 | Bacteria | Bacteria | 44.7 | 3.67e-4 | NR | GAA6820949.1 | 210 | g9231 | i0 | 48.8 | 0.759259259259259 | 41 | 14 | 63 | 1 | 162 | 61 | 2 | 42 | GAA6820949.1 hypothetical protein Kyoto200A_3790 [Helicobacter pylori] | diamond | 123 | 44.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;