RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB41113", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB41113 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29812198 29812198 PRJEB41113_S_NODE_3311_length_203_cov_3.108434_g3302_i0 PRJEB41113 3311 203 3.108434 6.31012102 Armatimonadota bacterium 2033014 Bacteria Bacteria 132 3.89e-34   NR MES2459770.1 2033014 g3302 i0 89.4 0.975369458128079 66 7 97.5 0 3 200 518 583 MES2459770.1 3D domain-containing protein [Armatimonadota bacterium] diamond 198 132 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30127957 30127957 PRJEB41113_S_NODE_2492_length_216_cov_3.530726_g2483_i0 PRJEB41113 2492 216 3.530726 7.62636816 Armatimonadota bacterium 2033014 Bacteria Bacteria 99.8 5.07e-25   NR MES2459009.1 2033014 g2483 i0 59.4 0.888888888888889 64 26 88.9 0 21 212 4 67 MES2459009.1 hypothetical protein [Armatimonadota bacterium] diamond 192 99.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;