contig_metadata
47 rows where bioproject = "PRJEB39643" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57439 | 57439 | PRJEB39643_P_NODE_130141_length_248_cov_1.760000_g129948_i0 | PRJEB39643 | 130141 | 248 | 1.76 | 4.3648 | Treponema vincentii | 69710 | Bacteria | Bacteria | 431 | 2.47e-116 | NTclustered | gi|2265136109|gb|CP051197.1| | 69710 | g129948 | i0 | 97.984 | 5.84274193548387 | 248 | 5 | 100 | 0 | 1 | 248 | 2225818 | 2225571 | Treponema vincentii strain OMZ 802 chromosome, complete genome | blastn | 1449 | 431 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 58054 | 58054 | PRJEB39643_P_NODE_43641_length_290_cov_1.419355_g43448_i0 | PRJEB39643 | 43641 | 290 | 1.419355 | 4.1161295 | Treponema sp. | 166 | Bacteria | Bacteria | 191 | 5.370000000000001e-59 | NR | MFC2329779.1 | 166 | g43448 | i0 | 96.9 | 0.993103448275862 | 96 | 3 | 99.3 | 0 | 288 | 1 | 149 | 244 | MFC2329779.1 hemolysin family protein [Treponema sp.] | diamond | 288 | 191 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 58337 | 58337 | PRJEB39643_P_NODE_71601_length_275_cov_1.524752_g71408_i0 | PRJEB39643 | 71601 | 275 | 1.524752 | 4.193068 | Treponema sp. OMZ 305 | 1659192 | Bacteria | Bacteria | 508 | 1.2499999999999999e-139 | NTclustered | gi|2265133351|gb|CP051300.1| | 1659192 | g71408 | i0 | 100 | 1 | 275 | 0 | 100 | 0 | 1 | 275 | 1053092 | 1053366 | Treponema sp. OMZ 305 chromosome, complete genome | blastn | 275 | 508 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 305 | ||
| 1332011 | 1332011 | PRJEB39643_P_NODE_156842_length_226_cov_2.013072_g156648_i0 | PRJEB39643 | 156842 | 226 | 2.013072 | 4.54954272 | Treponema sp. OMZ 838 | 1539298 | Bacteria | Bacteria | 401 | 1.7299999999999993e-107 | NTclustered | gi|719625061|gb|CP009227.1| | 1539298 | g156648 | i0 | 98.673 | 11.9778761061947 | 226 | 3 | 100 | 0 | 1 | 226 | 1022867 | 1022642 | Treponema sp. OMZ 838, complete genome | blastn | 2707 | 401 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 2607184 | 2607184 | PRJEB39643_P_NODE_117923_length_253_cov_1.711111_g117730_i0 | PRJEB39643 | 117923 | 253 | 1.711111 | 4.32911083 | Leptospira sp. severe_002 | 2838237 | Bacteria | Bacteria | 191 | 4.66e-44 | NTclustered | gi|2120242214|gb|CP075692.1| | 2838237 | g117730 | i0 | 80.545 | 54.6442687747036 | 257 | 42 | 100 | 7 | 1 | 253 | 126794 | 126542 | Leptospira sp. severe_002 chromosome 1 | blastn | 13825 | 191 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. severe_002 | ||
| 2607586 | 2607586 | PRJEB39643_P_NODE_15663_length_467_cov_3.352792_g15471_i0 | PRJEB39643 | 15663 | 467 | 3.352792 | 15.65753864 | Borreliella garinii | 29519 | Bacteria | Bacteria | 52.8 | 0.045 | NTclustered | gi|2592016991|gb|CP117904.1| | 29519 | g15471 | i0 | 100 | 0.0599571734475375 | 28 | 0 | 6 | 0 | 308 | 335 | 6364 | 6337 | Borreliella garinii strain FNG-1Z4 plasmid lp17, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 3884144 | 3884144 | PRJEB39643_P_NODE_40244_length_296_cov_2.215247_g40051_i0 | PRJEB39643 | 40244 | 296 | 2.215247 | 6.55713112 | Bacteria | 2 | Bacteria | Bacteria | 169 | 1.5599999999999994e-48 | NR | WP_135698469.1 | 409998 | g40051 | i0 | 83.7 | 18.8412162162162 | 98 | 16 | 99.3 | 0 | 2 | 295 | 303 | 400 | WP_135698469.1 acetyl-CoA hydrolase/transferase family protein [Leptospira wolffii] | diamond | 5577 | 169 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira wolffii | ||
| 4817368 | 4817368 | PRJEB39643_P_NODE_44824_length_289_cov_1.425926_g44631_i0 | PRJEB39643 | 44824 | 289 | 1.425926 | 4.12092614 | Treponema | 157 | Bacteria | Bacteria | 158 | 5.51e-34 | NTclustered | gi|2034589463|gb|CP050497.1| | 69710 | g44631 | i0 | 94.231 | 0.719723183391003 | 104 | 5 | 36 | 1 | 1 | 104 | 129804 | 129702 | Treponema vincentii strain OMZ 806 chromosome, complete genome | blastn | 208 | 158 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 6092656 | 6092656 | PRJEB39643_P_NODE_62125_length_280_cov_1.487923_g61932_i0 | PRJEB39643 | 62125 | 280 | 1.487923 | 4.1661844 | Treponema | 157 | Bacteria | Bacteria | 440 | 4.709999999999998e-119 | NTclustered | gi|1868715119|emb|LR796240.1| | 69713 | g61932 | i0 | 95 | 3 | 280 | 14 | 100 | 0 | 1 | 280 | 2536363 | 2536084 | Treponema socranskii subsp. buccale strain Marseille-CSURQ0203 genome assembly, chromosome: contig00001 | blastn | 840 | 440 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 8985332 | 8985332 | PRJEB39643_P_NODE_58488_length_282_cov_1.425837_g58295_i0 | PRJEB39643 | 58488 | 282 | 1.425837 | 4.02086034 | Treponema sp. OMZ 906 | 2563662 | Bacteria | Bacteria | 394 | 3.75e-105 | NTclustered | gi|2265130757|gb|CP051196.1| | 2563662 | g58295 | i0 | 97.021 | 3.37943262411348 | 235 | 6 | 83 | 1 | 1 | 235 | 1206824 | 1206591 | Treponema sp. OMZ 906 chromosome, complete genome | blastn | 953 | 394 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 906 | ||
| 8985424 | 8985424 | PRJEB39643_P_NODE_67788_length_277_cov_1.509804_g67595_i0 | PRJEB39643 | 67788 | 277 | 1.509804 | 4.18215708 | Treponema vincentii | 69710 | Bacteria | Bacteria | 496 | 9.8e-136 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g67595 | i0 | 98.917 | 3 | 277 | 3 | 100 | 0 | 1 | 277 | 94672 | 94948 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 831 | 496 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 8985731 | 8985731 | PRJEB39643_P_NODE_99628_length_261_cov_1.638298_g99435_i0 | PRJEB39643 | 99628 | 261 | 1.638298 | 4.27595778 | Treponema medium | 58231 | Bacteria | Bacteria | 399 | 7.379999999999998e-107 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g99435 | i0 | 94.253 | 14.0344827586207 | 261 | 15 | 100 | 0 | 1 | 261 | 2262446 | 2262186 | Treponema medium strain T19 chromosome, complete genome | blastn | 3663 | 399 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 11192865 | 11192865 | PRJEB39643_P_NODE_44789_length_289_cov_1.425926_g44596_i0 | PRJEB39643 | 44789 | 289 | 1.425926 | 4.12092614 | Treponema | 157 | Bacteria | Bacteria | 228 | 4.139999999999999e-55 | NTclustered | gi|719625061|gb|CP009227.1| | 1539298 | g44596 | i0 | 80.969 | 2 | 289 | 53 | 99 | 2 | 1 | 288 | 1085521 | 1085234 | Treponema sp. OMZ 838, complete genome | blastn | 578 | 228 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 15359367 | 15359367 | PRJEB39643_P_NODE_109053_length_257_cov_1.673913_g108860_i0 | PRJEB39643 | 109053 | 257 | 1.673913 | 4.30195641 | Treponema denticola | 158 | Bacteria | Bacteria | 390 | 4.359999999999999e-104 | NTclustered | gi|2265168914|gb|CP051304.1| | 158 | g108860 | i0 | 95.142 | 0.961089494163424 | 247 | 12 | 96 | 0 | 11 | 257 | 2611426 | 2611180 | Treponema denticola strain CD-1 chromosome, complete genome | blastn | 247 | 390 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 15359553 | 15359553 | PRJEB39643_P_NODE_1273_length_1537_cov_8.334699_g1218_i0 | PRJEB39643 | 1273 | 1537 | 8.334699 | 128.10432363 | Leptospira gorisiae | 3235175 | Bacteria | Bacteria | 54.7 | 0.044 | NTclustered | gi|2777199593|gb|CP162130.1| | 3235175 | g1218 | i0 | 100 | 0.0188679245283019 | 29 | 0 | 2 | 0 | 498 | 526 | 2735777 | 2735749 | Leptospira gorisiae strain WS92.C1 chromosome 1, complete sequence | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira gorisiae | ||
| 15360373 | 15360373 | PRJEB39643_P_NODE_56533_length_283_cov_1.466667_g56340_i0 | PRJEB39643 | 56533 | 283 | 1.466667 | 4.15066761 | Treponema socranskii | 53419 | Bacteria | Bacteria | 440 | 4.769999999999998e-119 | NTclustered | gi|1868715119|emb|LR796240.1| | 69713 | g56340 | i0 | 94.7 | 3.00706713780919 | 283 | 15 | 100 | 0 | 1 | 283 | 2479366 | 2479084 | Treponema socranskii subsp. buccale strain Marseille-CSURQ0203 genome assembly, chromosome: contig00001 | blastn | 851 | 440 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 16635207 | 16635207 | PRJEB39643_P_NODE_76534_length_272_cov_1.547739_g76341_i0 | PRJEB39643 | 76534 | 272 | 1.547739 | 4.20985008 | Leadbettera azotonutricia | 150829 | Bacteria | Bacteria | 87.9 | 6.84e-13 | NTclustered | gi|333734099|gb|CP001841.1| | 545695 | g76341 | i0 | 98.039 | 0.1875 | 51 | 0 | 18 | 1 | 186 | 235 | 3229953 | 3230003 | Treponema azotonutricium ZAS-9, complete genome | blastn | 51 | 87.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Leadbettera | Leadbettera azotonutricia | ||
| 17567155 | 17567155 | PRJEB39643_P_NODE_115694_length_254_cov_1.701657_g115501_i0 | PRJEB39643 | 115694 | 254 | 1.701657 | 4.32220878 | Treponema | 157 | Bacteria | Bacteria | 464 | 2.4999999999999994e-126 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g115501 | i0 | 99.606 | 7.97637795275591 | 254 | 1 | 100 | 0 | 1 | 254 | 1677123 | 1676870 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 2026 | 464 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 17567370 | 17567370 | PRJEB39643_P_NODE_70974_length_275_cov_1.524752_g70781_i0 | PRJEB39643 | 70974 | 275 | 1.524752 | 4.193068 | Treponema | 157 | Bacteria | Bacteria | 418 | 2.1599999999999995e-112 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g70781 | i0 | 96.443 | 2.70181818181818 | 253 | 9 | 92 | 0 | 23 | 275 | 2479899 | 2479647 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 743 | 418 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 17910011 | 17910011 | PRJEB39643_P_NODE_81575_length_270_cov_1.563452_g81382_i0 | PRJEB39643 | 81575 | 270 | 1.563452 | 4.2213204 | Treponema socranskii | 53419 | Bacteria | Bacteria | 416 | 7.619999999999998e-112 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g81382 | i0 | 95.185 | 1.12962962962963 | 270 | 2 | 100 | 1 | 1 | 270 | 2777309 | 2777567 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 305 | 416 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 19183014 | 19183014 | PRJEB39643_P_NODE_140676_length_244_cov_1.801170_g140483_i0 | PRJEB39643 | 140676 | 244 | 1.80117 | 4.3948548 | Treponema sp. OMZ 803 | 120682 | Bacteria | Bacteria | 315 | 2.5399999999999992e-81 | NTclustered | gi|2265127813|gb|CP051195.1| | 120682 | g140483 | i0 | 91.304 | 7.63114754098361 | 230 | 20 | 94 | 0 | 3 | 232 | 1284424 | 1284653 | Treponema sp. OMZ 803 strain BF2M chromosome, complete genome | blastn | 1862 | 315 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 803 | ||
| 19183920 | 19183920 | PRJEB39643_P_NODE_76556_length_272_cov_1.547739_g76363_i0 | PRJEB39643 | 76556 | 272 | 1.547739 | 4.20985008 | Treponema sp. | 166 | Bacteria | Bacteria | 97.8 | 4.51e-23 | NR | MFC2330807.1 | 166 | g76363 | i0 | 91.1 | 0.496323529411765 | 45 | 4 | 49.6 | 0 | 271 | 137 | 159 | 203 | MFC2330807.1 helix-turn-helix domain-containing protein [Treponema sp.] | diamond | 135 | 97.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 19184084 | 19184084 | PRJEB39643_P_NODE_93416_length_264_cov_1.612565_g93223_i0 | PRJEB39643 | 93416 | 264 | 1.612565 | 4.2571716 | Treponema vincentii | 69710 | Bacteria | Bacteria | 438 | 1.5799999999999996e-118 | NTclustered | gi|2034589463|gb|CP050497.1| | 69710 | g93223 | i0 | 96.591 | 13.0037878787879 | 264 | 9 | 100 | 0 | 1 | 264 | 135311 | 135574 | Treponema vincentii strain OMZ 806 chromosome, complete genome | blastn | 3433 | 438 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 20458058 | 20458058 | PRJEB39643_P_NODE_114917_length_254_cov_1.701657_g114724_i0 | PRJEB39643 | 114917 | 254 | 1.701657 | 4.32220878 | Treponema denticola | 158 | Bacteria | Bacteria | 442 | 1.1699999999999995e-119 | NTclustered | gi|2265190365|gb|CP054477.1| | 158 | g114724 | i0 | 98.031 | 50.9763779527559 | 254 | 5 | 100 | 0 | 1 | 254 | 1489233 | 1489486 | Treponema denticola strain OMZ 823 chromosome, complete genome | blastn | 12948 | 442 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 20458616 | 20458616 | PRJEB39643_P_NODE_24317_length_370_cov_2.074074_g24124_i0 | PRJEB39643 | 24317 | 370 | 2.074074 | 7.6740738 | Leptospira sp. severe_002 | 2838237 | Bacteria | Bacteria | 374 | 6.6099999999999995e-99 | NTclustered | gi|2120242214|gb|CP075692.1| | 2838237 | g24124 | i0 | 85.794 | 96.7054054054054 | 359 | 43 | 96 | 6 | 16 | 370 | 251313 | 251667 | Leptospira sp. severe_002 chromosome 1 | blastn | 35781 | 374 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. severe_002 | ||
| 21734918 | 21734918 | PRJEB39643_P_NODE_57098_length_282_cov_1.473684_g56905_i0 | PRJEB39643 | 57098 | 282 | 1.473684 | 4.15578888 | Treponema sp. OMZ 838 | 1539298 | Bacteria | Bacteria | 449 | 7.89e-122 | NTclustered | gi|719625061|gb|CP009227.1| | 1539298 | g56905 | i0 | 95.39 | 19.6737588652482 | 282 | 13 | 100 | 0 | 1 | 282 | 628651 | 628370 | Treponema sp. OMZ 838, complete genome | blastn | 5548 | 449 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 23009590 | 23009590 | PRJEB39643_P_NODE_145799_length_242_cov_1.822485_g145606_i0 | PRJEB39643 | 145799 | 242 | 1.822485 | 4.4104137 | Treponema sp. OMZ 803 | 120682 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|2265127813|gb|CP051195.1| | 120682 | g145606 | i0 | 99.587 | 2.65289256198347 | 242 | 1 | 100 | 0 | 1 | 242 | 917135 | 916894 | Treponema sp. OMZ 803 strain BF2M chromosome, complete genome | blastn | 642 | 442 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 803 | ||
| 23009961 | 23009961 | PRJEB39643_P_NODE_35079_length_314_cov_3.634855_g34886_i0 | PRJEB39643 | 35079 | 314 | 3.634855 | 11.4134447 | Leptospira sp. severe_002 | 2838237 | Bacteria | Bacteria | 202 | 2.7599999999999996e-47 | NTclustered | gi|2120242214|gb|CP075692.1| | 2838237 | g34886 | i0 | 90.26 | 21.8980891719745 | 154 | 15 | 49 | 0 | 161 | 314 | 350412 | 350565 | Leptospira sp. severe_002 chromosome 1 | blastn | 6876 | 202 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. severe_002 | ||
| 26589878 | 26589878 | PRJEB39643_P_NODE_103961_length_259_cov_1.655914_g103768_i0 | PRJEB39643 | 103961 | 259 | 1.655914 | 4.28881726 | Treponema sp. | 166 | Bacteria | Bacteria | 176 | 9.4e-52 | NR | MFC2602884.1 | 166 | g103768 | i0 | 98.8 | 0.984555984555985 | 85 | 0 | 98.5 | 1 | 3 | 257 | 164 | 247 | MFC2602884.1 hypothetical protein [Treponema sp.] | diamond | 255 | 176 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27539076 | 27539076 | PRJEB39643_P_NODE_86444_length_268_cov_1.579487_g86251_i0 | PRJEB39643 | 86444 | 268 | 1.579487 | 4.23302516 | Treponema sp. | 166 | Bacteria | Bacteria | 154 | 1.1099999999999998e-41 | NR | MFC2330220.1 | 166 | g86251 | i0 | 85.1 | 0.973880597014925 | 87 | 13 | 97.4 | 0 | 264 | 4 | 565 | 651 | MFC2330220.1 hypothetical protein [Treponema sp.] | diamond | 261 | 154 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27633751 | 27633751 | PRJEB39643_P_NODE_120244_length_252_cov_1.720670_g120051_i0 | PRJEB39643 | 120244 | 252 | 1.72067 | 4.3360884 | Treponema vincentii | 69710 | Bacteria | Bacteria | 81.3 | 1.12e-15 | NR | WP_230974681.1 | 69710 | g120051 | i0 | 58 | 1.70238095238095 | 81 | 32 | 96.4 | 1 | 6 | 248 | 2 | 80 | WP_230974681.1 tetratricopeptide repeat protein [Treponema vincentii] | diamond | 429 | 81.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 27854693 | 27854693 | PRJEB39643_P_NODE_80105_length_271_cov_1.555556_g79912_i0 | PRJEB39643 | 80105 | 271 | 1.555556 | 4.21555676 | Treponema sp. | 166 | Bacteria | Bacteria | 114 | 6.429999999999999e-31 | NR | MBR1721258.1 | 166 | g79912 | i0 | 87.9 | 1.28413284132841 | 58 | 7 | 64.2 | 0 | 1 | 174 | 45 | 102 | MBR1721258.1 DUF4406 domain-containing protein [Treponema sp.] | diamond | 348 | 114 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27917781 | 27917781 | PRJEB39643_P_NODE_87385_length_267_cov_1.587629_g87192_i0 | PRJEB39643 | 87385 | 267 | 1.587629 | 4.23896943 | Treponema sp. | 166 | Bacteria | Bacteria | 67 | 1.52e-10 | NR | MFC2330454.1 | 166 | g87192 | i0 | 66.2 | 0.764044943820225 | 68 | 23 | 76.4 | 0 | 204 | 1 | 2175 | 2242 | MFC2330454.1 beta strand repeat-containing protein [Treponema sp.] | diamond | 204 | 67 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28359752 | 28359752 | PRJEB39643_P_NODE_81846_length_270_cov_1.563452_g81653_i0 | PRJEB39643 | 81846 | 270 | 1.563452 | 4.2213204 | Treponema sp. | 166 | Bacteria | Bacteria | 140 | 1.7699999999999998e-37 | NR | MFC2602919.1 | 166 | g81653 | i0 | 98.6 | 0.788888888888889 | 71 | 1 | 78.9 | 0 | 56 | 268 | 1 | 71 | MFC2602919.1 MATE family efflux transporter [Treponema sp.] | diamond | 213 | 140 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28707330 | 28707330 | PRJEB39643_P_NODE_62087_length_280_cov_1.487923_g61894_i0 | PRJEB39643 | 62087 | 280 | 1.487923 | 4.1661844 | Treponema sp. | 166 | Bacteria | Bacteria | 101 | 3.35e-25 | NR | MFC2603475.1 | 166 | g61894 | i0 | 96.3 | 1.14642857142857 | 54 | 2 | 57.9 | 0 | 278 | 117 | 78 | 131 | MFC2603475.1 RNB domain-containing ribonuclease [Treponema sp.] | diamond | 321 | 101 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28770297 | 28770297 | PRJEB39643_P_NODE_45427_length_289_cov_1.425926_g45234_i0 | PRJEB39643 | 45427 | 289 | 1.425926 | 4.12092614 | Treponema vincentii | 69710 | Bacteria | Bacteria | 154 | 1.7699999999999993e-41 | NR | WP_016518597.1 | 69710 | g45234 | i0 | 76 | 0.996539792387543 | 96 | 23 | 99.7 | 0 | 1 | 288 | 267 | 362 | WP_016518597.1 methyl-accepting chemotaxis protein [Treponema vincentii] | diamond | 288 | 154 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 29963666 | 29963666 | PRJEB39643_P_NODE_27771_length_348_cov_2.374545_g27578_i0 | PRJEB39643 | 27771 | 348 | 2.374545 | 8.2634166 | root | 1 | Root_unresolved | Root_unresolved | 46.6 | 0.00534 | NR | MCC5813355.1 | 178 | g27578 | i0 | 44.7 | 2.18965517241379 | 47 | 19 | 34.5 | 1 | 292 | 173 | 433 | 479 | MCC5813355.1 tetratricopeptide repeat protein [Leptospira sp.] | diamond | 762 | 46.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 30507349 | 30507349 | PRJEB39643_P_NODE_118753_length_253_cov_1.711111_g118560_i0 | PRJEB39643 | 118753 | 253 | 1.711111 | 4.32911083 | Treponema pedis | 409322 | Bacteria | Bacteria | 50.8 | 2.5e-5 | NR | WP_252723459.1 | 409322 | g118560 | i0 | 64.1 | 0.924901185770751 | 39 | 14 | 46.2 | 0 | 243 | 127 | 127 | 165 | WP_252723459.1 ABC transporter permease subunit [Treponema pedis] | diamond | 234 | 50.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 30538929 | 30538929 | PRJEB39643_P_NODE_69633_length_276_cov_1.517241_g69440_i0 | PRJEB39643 | 69633 | 276 | 1.517241 | 4.18758516 | Treponema sp. | 166 | Bacteria | Bacteria | 181 | 1.15e-53 | NR | MFC2603926.1 | 166 | g69440 | i0 | 98.9 | 1 | 92 | 1 | 100 | 0 | 1 | 276 | 194 | 285 | MFC2603926.1 Crp/Fnr family transcriptional regulator [Treponema sp.] | diamond | 276 | 181 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30595340 | 30595340 | PRJEB39643_P_NODE_111973_length_256_cov_1.683060_g111780_i0 | PRJEB39643 | 111973 | 256 | 1.68306 | 4.3086336 | Treponema | 157 | Bacteria | Bacteria | 89.7 | 1.9e-21 | NR | MEL3906254.1 | 166 | g111780 | i0 | 60.6 | 5.34375 | 66 | 25 | 77.3 | 1 | 204 | 7 | 1 | 65 | MEL3906254.1 YdbC family protein [Treponema sp.] | diamond | 1368 | 90.1 | 0.995560488346282 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 31132324 | 31132324 | PRJEB39643_P_NODE_7875_length_724_cov_4.451613_g7706_i0 | PRJEB39643 | 7875 | 724 | 4.451613 | 32.22967812 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 113 | 3.62e-25 | NR | PJE04544.1 | 178 | g7706 | i0 | 33.3 | 2.3328729281768 | 222 | 129 | 89.5 | 8 | 6 | 653 | 206 | 414 | PJE04544.1 MAG: dehydrogenase [Leptospira sp.] | diamond | 1689 | 113 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 31518904 | 31518904 | PRJEB39643_P_NODE_99736_length_261_cov_1.638298_g99543_i0 | PRJEB39643 | 99736 | 261 | 1.638298 | 4.27595778 | Treponema denticola | 158 | Bacteria | Bacteria | 97.4 | 1.75e-23 | NR | WP_253702924.1 | 158 | g99543 | i0 | 62.5 | 2.95402298850575 | 80 | 30 | 92 | 0 | 3 | 242 | 51 | 130 | WP_253702924.1 Rpn family recombination-promoting nuclease/putative transposase [Treponema denticola] | diamond | 771 | 97.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 31613622 | 31613622 | PRJEB39643_P_NODE_48656_length_287_cov_1.439252_g48463_i0 | PRJEB39643 | 48656 | 287 | 1.439252 | 4.13065324 | Treponema sp. | 166 | Bacteria | Bacteria | 68.2 | 1.51e-12 | NR | MEE0886998.1 | 166 | g48463 | i0 | 96.9 | 0.334494773519164 | 32 | 1 | 33.4 | 0 | 189 | 284 | 1 | 32 | MEE0886998.1 virulence protein [Treponema sp.] | diamond | 96 | 68.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32024870 | 32024870 | PRJEB39643_P_NODE_100198_length_261_cov_1.638298_g100005_i0 | PRJEB39643 | 100198 | 261 | 1.638298 | 4.27595778 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 151 | 2.18e-40 | NR | WP_016525862.1 | 51160 | g100005 | i0 | 85.7 | 0.96551724137931 | 84 | 12 | 96.6 | 0 | 5 | 256 | 740 | 823 | WP_016525862.1 bifunctional aspartate kinase/homoserine dehydrogenase I [Treponema maltophilum] | diamond | 252 | 151 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 32562976 | 32562976 | PRJEB39643_P_NODE_124059_length_250_cov_1.740113_g123866_i0 | PRJEB39643 | 124059 | 250 | 1.740113 | 4.3502825 | Treponema | 157 | Bacteria | Bacteria | 127 | 5.23e-32 | NR | WP_002666949.1 | 157 | g123866 | i0 | 70.7 | 0.984 | 82 | 24 | 98.4 | 0 | 4 | 249 | 129 | 210 | WP_002666949.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B [Treponema] | diamond | 246 | 127 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | |||
| 32619106 | 32619106 | PRJEB39643_P_NODE_109040_length_257_cov_1.673913_g108847_i0 | PRJEB39643 | 109040 | 257 | 1.673913 | 4.30195641 | Treponema | 157 | Bacteria | Bacteria | 138 | 1.5e-38 | NR | WP_016522775.1 | 58231 | g108847 | i0 | 75.3 | 3.96887159533074 | 85 | 21 | 99.2 | 0 | 255 | 1 | 118 | 202 | WP_016522775.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Treponema medium] | diamond | 1020 | 138 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 32751722 | 32751722 | PRJEB39643_P_NODE_87460_length_267_cov_1.587629_g87267_i0 | PRJEB39643 | 87460 | 267 | 1.587629 | 4.23896943 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 57 | 4.49e-7 | NR | WP_277300214.1 | 167 | g87267 | i0 | 32.2 | 2.93258426966292 | 87 | 59 | 97.8 | 0 | 265 | 5 | 237 | 323 | WP_277300214.1 hypothetical protein [Treponema succinifaciens] | diamond | 783 | 57 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;