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contig_metadata

14 rows where bioproject = "PRJEB39643" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB39643 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2608342 2608342 PRJEB39643_P_NODE_82423_length_269_cov_3.500000_g82230_i0 PRJEB39643 82423 269 3.5 9.415 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 54.7 0.007   NTclustered gi|2318767725|ref|XM_051215408.1| 6185 g82230 i0 100 0.107806691449814 29 0 11 0 60 88 145 173 Schistosoma haematobium Transcription elongation factor SPT5 (SUPT5H), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
7710127 7710127 PRJEB39643_P_NODE_16067_length_460_cov_1.591731_g15875_i0 PRJEB39643 16067 460 1.591731 7.3219626 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 54.7 0.012   NTclustered gi|1084296938|ref|XM_018799815.1| 6183 g15875 i0 96.875 0.0695652173913043 32 1 7 0 257 288 3489 3458 Schistosoma mansoni putative na+/k+ atpase alpha subunit partial mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
10260346 10260346 PRJEB39643_P_NODE_14229_length_496_cov_3.638298_g14038_i0 PRJEB39643 14229 496 3.638298 18.04595808 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.048   NTclustered gi|690476386|emb|LN017327.1| 99802 g14038 i0 100 0.112903225806452 28 0 6 0 408 435 7563 7536 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0017075 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
11536084 11536084 PRJEB39643_P_NODE_27290_length_351_cov_2.021583_g27097_i0 PRJEB39643 27290 351 2.021583 7.09575633 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 134 6.86e-34   NR PAA69170.1 282301 g27097 i0 64.9 3.24786324786325 94 33 80.3 0 351 70 383 476 PAA69170.1 hypothetical protein BOX15_Mlig021895g1 [Macrostomum lignano] diamond 1140 134 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
12811033 12811033 PRJEB39643_P_NODE_139811_length_245_cov_0.895349_g139618_i0 PRJEB39643 139811 245 0.895349 2.19360505 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|690470369|emb|LN009608.1| 99802 g139618 i0 100 0.114285714285714 28 0 11 0 28 55 8530 8557 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0009499 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
21391480 21391480 PRJEB39643_P_NODE_152277_length_236_cov_4.588957_g152084_i0 PRJEB39643 152277 236 4.588957 10.82993852 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 109 3.75e-28   NR UAD82014.1 6161 g152084 i0 68.9 387.203389830508 74 23 94.1 0 222 1 3 76 UAD82014.1 RAS [Dugesia japonica] diamond 91380 110 0.990909090909091 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
27444507 27444507 PRJEB39643_P_NODE_115143_length_254_cov_1.701657_g114950_i0 PRJEB39643 115143 254 1.701657 4.32220878 Echinococcus multilocularis 6211 Platyhelminthes Platyhelminthes 46.2 0.0023   NR CDS40187.1 6211 g114950 i0 37.7 0.909448818897638 77 39 86.2 2 220 2 7 78 CDS40187.1 exosome complex exonuclease RRP42 [Echinococcus multilocularis] diamond 231 46.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus multilocularis
29079570 29079570 PRJEB39643_P_NODE_67368_length_277_cov_1.509804_g67175_i0 PRJEB39643 67368 277 1.509804 4.18215708 Metazoa 33208 Platyhelminthes Platyhelminthes 51.6 2.67e-5   NR VDP87489.1 27848 g67175 i0 45.9 1.55956678700361 61 27 66.1 1 50 232 114 168 VDP87489.1 unnamed protein product [Echinostoma caproni] diamond 432 51.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
29647410 29647410 PRJEB39643_P_NODE_66390_length_277_cov_2.264706_g66197_i0 PRJEB39643 66390 277 2.264706 6.27323562 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.5 1.71e-6   NR THD26861.1 6192 g66197 i0 38 7.97111913357401 79 47 83.4 2 47 277 119 197 THD26861.1 hypothetical protein D915_002275 [Fasciola hepatica] diamond 2208 55.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
31297314 31297314 PRJEB39643_P_NODE_62215_length_280_cov_1.487923_g62022_i0 PRJEB39643 62215 280 1.487923 4.1661844 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 47 0.00183   NR PAA86220.1 282301 g62022 i0 31.9 0.771428571428571 72 47 75 1 40 249 76 147 PAA86220.1 hypothetical protein BOX15_Mlig009159g3 [Macrostomum lignano] diamond 216 47 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
31550569 31550569 PRJEB39643_P_NODE_13016_length_525_cov_5.123894_g12826_i0 PRJEB39643 13016 525 5.123894 26.9004435 Capsala katsuwoni 2904576 Platyhelminthes Platyhelminthes 46.6 0.0212   NR YP_010350549.1 2904576 g12826 i0 42 0.394285714285714 69 38 39.4 1 446 240 226 292 YP_010350549.1 NADH dehydrogenase subunit 4 [Capsala katsuwoni] diamond 207 46.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Capsalidea Capsalidae Capsala Capsala katsuwoni
31701884 31701884 PRJEB39643_P_NODE_156277_length_226_cov_2.013072_g156083_i0 PRJEB39643 156277 226 2.013072 4.54954272 Metazoa 33208 Platyhelminthes Platyhelminthes 67.8 2.84e-11   NR VDN98467.1 102285 g156083 i0 53.3 4.07522123893805 45 21 59.7 0 135 1 21 65 VDN98467.1 unnamed protein product [Rodentolepis nana] diamond 921 67.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Rodentolepis Rodentolepis nana
32531281 32531281 PRJEB39643_P_NODE_19239_length_416_cov_2.431487_g19046_i0 PRJEB39643 19239 416 2.431487 10.11498592 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 48.1 0.00172   NR PAA72397.1 282301 g19046 i0 28.3 1.86778846153846 120 53 83.7 4 65 412 51 141 PAA72397.1 hypothetical protein BOX15_Mlig017771g3 [Macrostomum lignano] diamond 777 48.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
32902401 32902401 PRJEB39643_P_NODE_8640_length_682_cov_10.865353_g8463_i0 PRJEB39643 8640 682 10.865353 74.10170746 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 197 7.889999999999999e-60   NR AAW27674.1 6182 g8463 i0 51.5 25.3196480938416 200 96 88 1 25 624 5 203 AAW27674.1 SJCHGC04249 protein [Schistosoma japonicum] diamond 17268 197 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;