RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB39643" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB39643 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29181019 29181019 PRJEB39643_P_NODE_92329_length_265_cov_1.604167_g92136_i0 PRJEB39643 92329 265 1.604167 4.25104255 Chlamydiia bacterium 2052156 Bacteria Bacteria 99 2.83e-22   NR MCH9621376.1 2052156 g92136 i0 46.5 1.94716981132075 86 46 97.4 0 261 4 43 128 MCH9621376.1 Capreomycidine synthase [Chlamydiia bacterium] diamond 516 99 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
31676721 31676721 PRJEB39643_P_NODE_102577_length_260_cov_1.647059_g102384_i0 PRJEB39643 102577 260 1.647059 4.2823534 Chlamydiales bacterium 2047757 Bacteria Bacteria 53.1 8.16e-6   NR NCF70664.1 2047757 g102384 i0 43.1 0.75 65 36 75 1 3 197 133 196 NCF70664.1 hypothetical protein [Chlamydiales bacterium] diamond 195 53.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;