contig_metadata
82 rows where bioproject = "PRJEB39643", tax_phylum = "Campylobacterota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57219 | 57219 | PRJEB39643_P_NODE_107641_length_258_cov_1.654054_g107448_i0 | PRJEB39643 | 107641 | 258 | 1.654054 | 4.26745932 | Campylobacter concisus | 199 | Bacteria | Bacteria | 433 | 7.18e-117 | NTclustered | gi|2699822930|gb|CP147773.1| | 199 | g107448 | i0 | 96.899 | 17 | 258 | 8 | 100 | 0 | 1 | 258 | 1307080 | 1306823 | Campylobacter concisus strain RMIT-O23 chromosome | blastn | 4386 | 433 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 57312 | 57312 | PRJEB39643_P_NODE_116581_length_254_cov_1.701657_g116388_i0 | PRJEB39643 | 116581 | 254 | 1.701657 | 4.32220878 | Campylobacter concisus | 199 | Bacteria | Bacteria | 470 | 5.37e-128 | NTclustered | gi|2700477995|gb|CP147775.1| | 199 | g116388 | i0 | 100 | 17 | 254 | 0 | 100 | 0 | 1 | 254 | 1569073 | 1568820 | Campylobacter concisus strain RMIT-O23 chromosome | blastn | 4318 | 470 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 58077 | 58077 | PRJEB39643_P_NODE_45481_length_289_cov_1.425926_g45288_i0 | PRJEB39643 | 45481 | 289 | 1.425926 | 4.12092614 | Campylobacter concisus | 199 | Bacteria | Bacteria | 534 | 2.18e-147 | NTclustered | gi|1376251231|gb|CP021642.1| | 199 | g45288 | i0 | 100 | 16.9584775086505 | 289 | 0 | 100 | 0 | 1 | 289 | 1064321 | 1064609 | Campylobacter concisus strain P2CDO4 chromosome, complete genome | blastn | 4901 | 534 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 58436 | 58436 | PRJEB39643_P_NODE_81201_length_270_cov_1.563452_g81008_i0 | PRJEB39643 | 81201 | 270 | 1.563452 | 4.2213204 | Campylobacter showae | 204 | Bacteria | Bacteria | 466 | 7.46e-127 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g81008 | i0 | 97.778 | 10.9555555555556 | 270 | 6 | 100 | 0 | 1 | 270 | 298557 | 298826 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 2958 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 1331431 | 1331431 | PRJEB39643_P_NODE_102402_length_260_cov_1.647059_g102209_i0 | PRJEB39643 | 102402 | 260 | 1.647059 | 4.2823534 | Campylobacter concisus | 199 | Bacteria | Bacteria | 420 | 5.64e-113 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g102209 | i0 | 95.769 | 11.0076923076923 | 260 | 11 | 100 | 0 | 1 | 260 | 268382 | 268641 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 2862 | 420 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 1331565 | 1331565 | PRJEB39643_P_NODE_115922_length_254_cov_1.701657_g115729_i0 | PRJEB39643 | 115922 | 254 | 1.701657 | 4.32220878 | Campylobacter concisus | 199 | Bacteria | Bacteria | 464 | 2.4999999999999994e-126 | NTclustered | gi|1376251231|gb|CP021642.1| | 199 | g115729 | i0 | 99.606 | 15.9842519685039 | 254 | 1 | 100 | 0 | 1 | 254 | 58299 | 58046 | Campylobacter concisus strain P2CDO4 chromosome, complete genome | blastn | 4060 | 464 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 1331998 | 1331998 | PRJEB39643_P_NODE_15602_length_468_cov_3.321519_g15410_i0 | PRJEB39643 | 15602 | 468 | 3.321519 | 15.54470892 | Halarcobacter sp. | 2321133 | Bacteria | Bacteria | 52.8 | 0.045 | NTclustered | gi|2622071902|emb|OY787454.1| | 2321133 | g15410 | i0 | 100 | 0.179487179487179 | 28 | 0 | 6 | 0 | 278 | 305 | 1451010 | 1450983 | MAG: Halarcobacter sp. isolate cd427b1f-7c2e-48dd-9f6e-f81188dbe24a genome assembly, chromosome: 1 | blastn | 84 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Halarcobacter | Halarcobacter sp. | ||
| 1332303 | 1332303 | PRJEB39643_P_NODE_38162_length_303_cov_3.369565_g37969_i0 | PRJEB39643 | 38162 | 303 | 3.369565 | 10.20978195 | Campylobacter lari | 201 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|2878590106|gb|CP176604.1| | 488545 | g37969 | i0 | 96.875 | 4.85808580858086 | 32 | 1 | 11 | 0 | 20 | 51 | 1329694 | 1329663 | Campylobacter lari subsp. concheus strain RM19222 chromosome, complete genome | blastn | 1472 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter lari | ||
| 1332527 | 1332527 | PRJEB39643_P_NODE_59022_length_281_cov_1.480769_g58829_i0 | PRJEB39643 | 59022 | 281 | 1.480769 | 4.16096089 | Campylobacter rectus | 203 | Bacteria | Bacteria | 342 | 1.3699999999999997e-89 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g58829 | i0 | 88.693 | 8.2491103202847 | 283 | 28 | 100 | 4 | 1 | 281 | 1331143 | 1330863 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 2318 | 342 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 2607150 | 2607150 | PRJEB39643_P_NODE_113263_length_255_cov_1.692308_g113070_i0 | PRJEB39643 | 113263 | 255 | 1.692308 | 4.3153854 | Campylobacter concisus | 199 | Bacteria | Bacteria | 472 | 1.5e-128 | NTclustered | gi|1938715890|gb|CP049263.1| | 199 | g113070 | i0 | 100 | 20.956862745098 | 255 | 0 | 100 | 0 | 1 | 255 | 913879 | 914133 | Campylobacter concisus strain H16O-S1 chromosome, complete genome | blastn | 5344 | 472 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 2607455 | 2607455 | PRJEB39643_P_NODE_144943_length_243_cov_1.694118_g144750_i0 | PRJEB39643 | 144943 | 243 | 1.694118 | 4.11670674 | Campylobacter vicugnae | 1660076 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1192708697|gb|CP018791.1| | 1660076 | g144750 | i0 | 100 | 0.11522633744856 | 28 | 0 | 12 | 0 | 188 | 215 | 165364 | 165391 | Campylobacter vicugnae strain RM8964, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter vicugnae | ||
| 2607551 | 2607551 | PRJEB39643_P_NODE_15363_length_473_cov_1.155000_g15172_i0 | PRJEB39643 | 15363 | 473 | 1.155 | 5.46315 | Campylobacter blaseri | 2042961 | Bacteria | Bacteria | 52.8 | 0.046 | NTclustered | gi|1847329769|gb|CP053841.1| | 2042961 | g15172 | i0 | 100 | 0.0591966173361522 | 28 | 0 | 6 | 0 | 201 | 228 | 1677774 | 1677747 | Campylobacter blaseri strain LMG 30333 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter blaseri | ||
| 2608348 | 2608348 | PRJEB39643_P_NODE_82763_length_269_cov_1.571429_g82570_i0 | PRJEB39643 | 82763 | 269 | 1.571429 | 4.22714401 | Campylobacter concisus | 199 | Bacteria | Bacteria | 435 | 2.09e-117 | NTclustered | gi|1935893765|gb|CP049234.1| | 199 | g82570 | i0 | 95.911 | 18.453531598513 | 269 | 10 | 100 | 1 | 1 | 269 | 155549 | 155816 | Campylobacter concisus strain P15UCO-S2 chromosome, complete genome | blastn | 4964 | 435 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 2608417 | 2608417 | PRJEB39643_P_NODE_89543_length_266_cov_1.595855_g89350_i0 | PRJEB39643 | 89543 | 266 | 1.595855 | 4.2449743 | Campylobacter concisus | 199 | Bacteria | Bacteria | 492 | 1.2099999999999999e-134 | NTclustered | gi|1938715890|gb|CP049263.1| | 199 | g89350 | i0 | 100 | 24.5413533834586 | 266 | 0 | 100 | 0 | 1 | 266 | 830903 | 831168 | Campylobacter concisus strain H16O-S1 chromosome, complete genome | blastn | 6528 | 492 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 3883307 | 3883307 | PRJEB39643_P_NODE_107304_length_258_cov_1.664865_g107111_i0 | PRJEB39643 | 107304 | 258 | 1.664865 | 4.2953517 | Campylobacter concisus | 199 | Bacteria | Bacteria | 477 | 3.2699999999999985e-130 | NTclustered | gi|1376253191|gb|CP021643.1| | 199 | g107111 | i0 | 100 | 1 | 258 | 0 | 100 | 0 | 1 | 258 | 60980 | 60723 | Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence | blastn | 258 | 477 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 3883362 | 3883362 | PRJEB39643_P_NODE_112664_length_255_cov_1.692308_g112471_i0 | PRJEB39643 | 112664 | 255 | 1.692308 | 4.3153854 | Campylobacter showae | 204 | Bacteria | Bacteria | 427 | 3.2899999999999992e-115 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g112471 | i0 | 96.863 | 10.1137254901961 | 255 | 8 | 100 | 0 | 1 | 255 | 1530222 | 1529968 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 2579 | 427 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 3884546 | 3884546 | PRJEB39643_P_NODE_81344_length_270_cov_1.563452_g81151_i0 | PRJEB39643 | 81344 | 270 | 1.563452 | 4.2213204 | Campylobacter concisus | 199 | Bacteria | Bacteria | 499 | 7.349999999999998e-137 | NTclustered | gi|1938724023|gb|CP060707.1| | 199 | g81151 | i0 | 100 | 17.9925925925926 | 270 | 0 | 100 | 0 | 1 | 270 | 1530821 | 1531090 | Campylobacter concisus strain P1CDO2 chromosome, complete genome | blastn | 4858 | 499 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 3884582 | 3884582 | PRJEB39643_P_NODE_84364_length_269_cov_1.571429_g84171_i0 | PRJEB39643 | 84364 | 269 | 1.571429 | 4.22714401 | Campylobacter concisus | 199 | Bacteria | Bacteria | 449 | 7.48e-122 | NTclustered | gi|1063302220|gb|CP000792.2| | 360104 | g84171 | i0 | 97.004 | 14.814126394052 | 267 | 8 | 99 | 0 | 1 | 267 | 1776277 | 1776543 | Campylobacter concisus 13826 chromosome, complete genome | blastn | 3985 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 3884721 | 3884721 | PRJEB39643_P_NODE_98664_length_262_cov_1.629630_g98471_i0 | PRJEB39643 | 98664 | 262 | 1.62963 | 4.2696306 | Campylobacter concisus | 199 | Bacteria | Bacteria | 135 | 2.31e-27 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g98471 | i0 | 80.829 | 12.9465648854962 | 193 | 20 | 75 | 14 | 28 | 210 | 1581254 | 1581069 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 3392 | 135 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 5159484 | 5159484 | PRJEB39643_P_NODE_104585_length_259_cov_1.655914_g104392_i0 | PRJEB39643 | 104585 | 259 | 1.655914 | 4.28881726 | Campylobacter concisus | 199 | Bacteria | Bacteria | 440 | 4.309999999999998e-119 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g104392 | i0 | 97.297 | 19.007722007722 | 259 | 7 | 100 | 0 | 1 | 259 | 176782 | 176524 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 4923 | 440 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 6435696 | 6435696 | PRJEB39643_P_NODE_139406_length_245_cov_1.750000_g139213_i0 | PRJEB39643 | 139406 | 245 | 1.75 | 4.2875 | uncultured Sulfurimonas sp. | 291845 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2621701203|emb|OY759725.1| | 291845 | g139213 | i0 | 100 | 0.122448979591837 | 30 | 0 | 12 | 0 | 116 | 145 | 118860 | 118889 | MAG: uncultured Sulfurimonas sp. isolate a78221b3-3849-449b-b167-7d88721915ac genome assembly, chromosome: 1 | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | uncultured Sulfurimonas sp. | ||
| 6436381 | 6436381 | PRJEB39643_P_NODE_52746_length_285_cov_1.452830_g52553_i0 | PRJEB39643 | 52746 | 285 | 1.45283 | 4.1405655 | Campylobacter showae | 204 | Bacteria | Bacteria | 431 | 2.89e-116 | NTclustered | gi|1483583565|emb|LT631545.1| | 204 | g52553 | i0 | 94.014 | 10.9929824561404 | 284 | 17 | 99 | 0 | 2 | 285 | 2114329 | 2114612 | Campylobacter showae strain B32_SW genome assembly, chromosome: I | blastn | 3133 | 431 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 6436532 | 6436532 | PRJEB39643_P_NODE_67066_length_277_cov_1.509804_g66873_i0 | PRJEB39643 | 67066 | 277 | 1.509804 | 4.18215708 | Campylobacter concisus | 199 | Bacteria | Bacteria | 473 | 4.5899999999999986e-129 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g66873 | i0 | 97.473 | 17.9458483754513 | 277 | 7 | 100 | 0 | 1 | 277 | 1462376 | 1462100 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 4971 | 473 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 7367080 | 7367080 | PRJEB39643_P_NODE_50306_length_286_cov_1.446009_g50113_i0 | PRJEB39643 | 50306 | 286 | 1.446009 | 4.13558574 | Campylobacter | 194 | Bacteria | Bacteria | 462 | 1.03e-125 | NTclustered | gi|2093921460|gb|CP082871.1| | 76517 | g50113 | i0 | 95.804 | 5.71328671328671 | 286 | 12 | 100 | 0 | 1 | 286 | 205834 | 205549 | Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome | blastn | 1634 | 462 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 7709506 | 7709506 | PRJEB39643_P_NODE_100767_length_261_cov_1.638298_g100574_i0 | PRJEB39643 | 100767 | 261 | 1.638298 | 4.27595778 | Campylobacter showae | 204 | Bacteria | Bacteria | 353 | 5.83e-93 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g100574 | i0 | 91.154 | 0.996168582375479 | 260 | 23 | 99 | 0 | 2 | 261 | 113238 | 112979 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 260 | 353 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 7710721 | 7710721 | PRJEB39643_P_NODE_67347_length_277_cov_1.509804_g67154_i0 | PRJEB39643 | 67347 | 277 | 1.509804 | 4.18215708 | Campylobacter concisus | 199 | Bacteria | Bacteria | 507 | 4.53e-139 | NTclustered | gi|1938724023|gb|CP060707.1| | 199 | g67154 | i0 | 99.639 | 17.9675090252708 | 277 | 1 | 100 | 0 | 1 | 277 | 77464 | 77188 | Campylobacter concisus strain P1CDO2 chromosome, complete genome | blastn | 4977 | 507 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 8985177 | 8985177 | PRJEB39643_P_NODE_42528_length_290_cov_1.419355_g42335_i0 | PRJEB39643 | 42528 | 290 | 1.419355 | 4.1161295 | Campylobacter concisus | 199 | Bacteria | Bacteria | 508 | 1.33e-139 | NTclustered | gi|1063302220|gb|CP000792.2| | 360104 | g42335 | i0 | 98.276 | 17.8413793103448 | 290 | 5 | 100 | 0 | 1 | 290 | 276719 | 277008 | Campylobacter concisus 13826 chromosome, complete genome | blastn | 5174 | 508 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 8985664 | 8985664 | PRJEB39643_P_NODE_93188_length_264_cov_1.612565_g92995_i0 | PRJEB39643 | 93188 | 264 | 1.612565 | 4.2571716 | Campylobacter concisus | 199 | Bacteria | Bacteria | 394 | 3.48e-105 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g92995 | i0 | 93.561 | 16.8219696969697 | 264 | 17 | 100 | 0 | 1 | 264 | 392625 | 392888 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 4441 | 394 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 9917698 | 9917698 | PRJEB39643_P_NODE_5688_length_875_cov_2.089776_g5546_i0 | PRJEB39643 | 5688 | 875 | 2.089776 | 18.28554 | Campylobacter | 194 | Bacteria | Bacteria | 56.5 | 0.007 | NTclustered | gi|2473669984|gb|CP047197.1| | 195 | g5546 | i0 | 96.97 | 0.226285714285714 | 33 | 1 | 4 | 0 | 106 | 138 | 1510439 | 1510407 | Campylobacter coli strain JZ_1_95 chromosome, complete genome | blastn | 198 | 56.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 10260061 | 10260061 | PRJEB39643_P_NODE_116489_length_254_cov_1.701657_g116296_i0 | PRJEB39643 | 116489 | 254 | 1.701657 | 4.32220878 | Campylobacter rectus | 203 | Bacteria | Bacteria | 387 | 5.569999999999998e-103 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g116296 | i0 | 94.094 | 2 | 254 | 15 | 100 | 0 | 1 | 254 | 1736431 | 1736178 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 508 | 387 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 10260224 | 10260224 | PRJEB39643_P_NODE_130069_length_248_cov_1.760000_g129876_i0 | PRJEB39643 | 130069 | 248 | 1.76 | 4.3648 | Campylobacter concisus | 199 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|1938717787|gb|CP060705.1| | 199 | g129876 | i0 | 100 | 18.0201612903226 | 248 | 0 | 100 | 0 | 1 | 248 | 1944378 | 1944131 | Campylobacter concisus strain P13UCO-S1 chromosome, complete genome | blastn | 4469 | 459 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 10260301 | 10260301 | PRJEB39643_P_NODE_137989_length_245_cov_1.790698_g137796_i0 | PRJEB39643 | 137989 | 245 | 1.790698 | 4.3872101 | Campylobacter concisus | 199 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1938721720|gb|CP049266.1| | 199 | g137796 | i0 | 100 | 3.89795918367347 | 245 | 0 | 100 | 0 | 1 | 245 | 149491 | 149735 | Campylobacter concisus strain P1CDO3 chromosome, complete genome | blastn | 955 | 453 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 11535636 | 11535636 | PRJEB39643_P_NODE_130950_length_248_cov_1.760000_g130757_i0 | PRJEB39643 | 130950 | 248 | 1.76 | 4.3648 | Campylobacter showae | 204 | Bacteria | Bacteria | 414 | 2.48e-111 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g130757 | i0 | 96.774 | 11.5927419354839 | 248 | 8 | 100 | 0 | 1 | 248 | 1516951 | 1516704 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 2875 | 414 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 11535672 | 11535672 | PRJEB39643_P_NODE_135290_length_246_cov_1.780347_g135097_i0 | PRJEB39643 | 135290 | 246 | 1.780347 | 4.37965362 | Campylobacter concisus | 199 | Bacteria | Bacteria | 361 | 3.25e-95 | NTclustered | gi|1063302220|gb|CP000792.2| | 360104 | g135097 | i0 | 93.776 | 3.58943089430894 | 241 | 13 | 98 | 2 | 1 | 240 | 1929044 | 1929283 | Campylobacter concisus 13826 chromosome, complete genome | blastn | 883 | 361 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 11536156 | 11536156 | PRJEB39643_P_NODE_33790_length_320_cov_0.991903_g33597_i0 | PRJEB39643 | 33790 | 320 | 0.991903 | 3.1740896 | Candidatus Sulfurimonas baltica | 2740404 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|1929272150|gb|CP054492.1| | 2740404 | g33597 | i0 | 100 | 0.090625 | 29 | 0 | 9 | 0 | 114 | 142 | 784017 | 784045 | Candidatus Sulfurimonas baltica strain GD2 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Candidatus Sulfurimonas baltica | ||
| 11536693 | 11536693 | PRJEB39643_P_NODE_89850_length_266_cov_1.595855_g89657_i0 | PRJEB39643 | 89850 | 266 | 1.595855 | 4.2449743 | Campylobacter concisus | 199 | Bacteria | Bacteria | 492 | 1.2099999999999999e-134 | NTclustered | gi|1063302220|gb|CP000792.2| | 360104 | g89657 | i0 | 100 | 11.0037593984962 | 266 | 0 | 100 | 0 | 1 | 266 | 50805 | 50540 | Campylobacter concisus 13826 chromosome, complete genome | blastn | 2927 | 492 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 12810795 | 12810795 | PRJEB39643_P_NODE_115911_length_254_cov_1.701657_g115718_i0 | PRJEB39643 | 115911 | 254 | 1.701657 | 4.32220878 | Campylobacter showae | 204 | Bacteria | Bacteria | 470 | 5.37e-128 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g115718 | i0 | 100 | 6 | 254 | 0 | 100 | 0 | 1 | 254 | 2046618 | 2046365 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 1524 | 470 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 12810850 | 12810850 | PRJEB39643_P_NODE_120831_length_252_cov_1.720670_g120638_i0 | PRJEB39643 | 120831 | 252 | 1.72067 | 4.3360884 | Campylobacter concisus | 199 | Bacteria | Bacteria | 416 | 7.029999999999999e-112 | NTclustered | gi|2699822930|gb|CP147773.1| | 199 | g120638 | i0 | 96.429 | 13.8492063492063 | 252 | 9 | 100 | 0 | 1 | 252 | 1669527 | 1669276 | Campylobacter concisus strain RMIT-O23 chromosome | blastn | 3490 | 416 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 12811338 | 12811338 | PRJEB39643_P_NODE_24131_length_371_cov_4.130872_g23938_i0 | PRJEB39643 | 24131 | 371 | 4.130872 | 15.32553512 | Campylobacter sp. CCS1377 | 3158229 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|2738339955|gb|CP155620.1| | 3158229 | g23938 | i0 | 100 | 0.0754716981132075 | 28 | 0 | 8 | 0 | 85 | 112 | 1150246 | 1150273 | Campylobacter sp. CCS1377 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CCS1377 | ||
| 12811882 | 12811882 | PRJEB39643_P_NODE_75271_length_273_cov_1.540000_g75078_i0 | PRJEB39643 | 75271 | 273 | 1.54 | 4.2042 | Campylobacter concisus | 199 | Bacteria | Bacteria | 399 | 7.769999999999998e-107 | NTclustered | gi|1938728373|gb|CP049272.1| | 199 | g75078 | i0 | 93.04 | 16.6080586080586 | 273 | 19 | 100 | 0 | 1 | 273 | 639939 | 639667 | Campylobacter concisus strain P27CDO-S2 chromosome, complete genome | blastn | 4534 | 399 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 12812084 | 12812084 | PRJEB39643_P_NODE_98191_length_262_cov_1.629630_g97998_i0 | PRJEB39643 | 98191 | 262 | 1.62963 | 4.2696306 | Campylobacter rectus | 203 | Bacteria | Bacteria | 318 | 2.1299999999999995e-82 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g97998 | i0 | 89.695 | 2 | 262 | 9 | 100 | 4 | 1 | 262 | 694665 | 694908 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 524 | 318 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 14085779 | 14085779 | PRJEB39643_P_NODE_137612_length_245_cov_1.790698_g137419_i0 | PRJEB39643 | 137612 | 245 | 1.790698 | 4.3872101 | Campylobacter concisus | 199 | Bacteria | Bacteria | 424 | 4.07e-114 | NTclustered | gi|1935893765|gb|CP049234.1| | 199 | g137419 | i0 | 97.951 | 16.5591836734694 | 244 | 5 | 99 | 0 | 1 | 244 | 1033219 | 1032976 | Campylobacter concisus strain P15UCO-S2 chromosome, complete genome | blastn | 4057 | 424 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 15359425 | 15359425 | PRJEB39643_P_NODE_114833_length_254_cov_1.701657_g114640_i0 | PRJEB39643 | 114833 | 254 | 1.701657 | 4.32220878 | Campylobacter concisus | 199 | Bacteria | Bacteria | 448 | 2.5199999999999996e-121 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g114640 | i0 | 98.425 | 9.00393700787402 | 254 | 4 | 100 | 0 | 1 | 254 | 1967399 | 1967146 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 2287 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 15359848 | 15359848 | PRJEB39643_P_NODE_156293_length_226_cov_2.013072_g156099_i0 | PRJEB39643 | 156293 | 226 | 2.013072 | 4.54954272 | Campylobacter concisus | 199 | Bacteria | Bacteria | 379 | 8.119999999999998e-101 | NTclustered | gi|2700477995|gb|CP147775.1| | 199 | g156099 | i0 | 96.903 | 11.0132743362832 | 226 | 7 | 100 | 0 | 1 | 226 | 2122654 | 2122429 | Campylobacter concisus strain RMIT-O23 chromosome | blastn | 2489 | 379 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 15360301 | 15360301 | PRJEB39643_P_NODE_50053_length_286_cov_1.446009_g49860_i0 | PRJEB39643 | 50053 | 286 | 1.446009 | 4.13558574 | Campylobacter concisus | 199 | Bacteria | Bacteria | 468 | 2.21e-127 | NTclustered | gi|1938726479|gb|CP049270.1| | 199 | g49860 | i0 | 96.154 | 20.1923076923077 | 286 | 11 | 100 | 0 | 1 | 286 | 1429388 | 1429103 | Campylobacter concisus strain P26UCO-S2 chromosome, complete genome | blastn | 5775 | 468 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 15360400 | 15360400 | PRJEB39643_P_NODE_59333_length_281_cov_1.480769_g59140_i0 | PRJEB39643 | 59333 | 281 | 1.480769 | 4.16096089 | Campylobacter concisus | 199 | Bacteria | Bacteria | 442 | 1.3199999999999993e-119 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g59140 | i0 | 95.018 | 7.24555160142349 | 281 | 14 | 100 | 0 | 1 | 281 | 681624 | 681904 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 2036 | 442 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 16292290 | 16292290 | PRJEB39643_P_NODE_73573_length_274_cov_1.532338_g73380_i0 | PRJEB39643 | 73573 | 274 | 1.532338 | 4.19860612 | Campylobacter | 194 | Bacteria | Bacteria | 479 | 9.74e-131 | NTclustered | gi|1938717787|gb|CP060705.1| | 199 | g73380 | i0 | 98.175 | 18.007299270073 | 274 | 5 | 100 | 0 | 1 | 274 | 1156279 | 1156006 | Campylobacter concisus strain P13UCO-S1 chromosome, complete genome | blastn | 4934 | 479 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 16633963 | 16633963 | PRJEB39643_P_NODE_101134_length_261_cov_1.638298_g100941_i0 | PRJEB39643 | 101134 | 261 | 1.638298 | 4.27595778 | Campylobacter rectus | 203 | Bacteria | Bacteria | 414 | 2.63e-111 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g100941 | i0 | 95.385 | 11.7586206896552 | 260 | 12 | 99 | 0 | 2 | 261 | 1817989 | 1817730 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 3069 | 414 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 17908860 | 17908860 | PRJEB39643_P_NODE_115535_length_254_cov_1.701657_g115342_i0 | PRJEB39643 | 115535 | 254 | 1.701657 | 4.32220878 | Campylobacter concisus | 199 | Bacteria | Bacteria | 403 | 5.53e-108 | NTclustered | gi|1938715890|gb|CP049263.1| | 199 | g115342 | i0 | 95.276 | 22.0196850393701 | 254 | 12 | 100 | 0 | 1 | 254 | 1358406 | 1358659 | Campylobacter concisus strain H16O-S1 chromosome, complete genome | blastn | 5593 | 403 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 17910105 | 17910105 | PRJEB39643_P_NODE_91775_length_265_cov_1.604167_g91582_i0 | PRJEB39643 | 91775 | 265 | 1.604167 | 4.25104255 | Campylobacter concisus | 199 | Bacteria | Bacteria | 484 | 2.0199999999999998e-132 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g91582 | i0 | 99.623 | 1 | 265 | 1 | 100 | 0 | 1 | 265 | 1865522 | 1865786 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 265 | 484 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 18841266 | 18841266 | PRJEB39643_P_NODE_86295_length_268_cov_1.579487_g86102_i0 | PRJEB39643 | 86295 | 268 | 1.579487 | 4.23302516 | Campylobacter | 194 | Bacteria | Bacteria | 466 | 7.39e-127 | NTclustered | gi|1721134170|emb|LR698972.1| | 200 | g86102 | i0 | 98.127 | 3.98507462686567 | 267 | 5 | 99 | 0 | 1 | 267 | 785532 | 785266 | Campylobacter curvus isolate MGYG-HGUT-01706 genome assembly, chromosome: 1 | blastn | 1068 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter curvus | ||
| 19183355 | 19183355 | PRJEB39643_P_NODE_24176_length_371_cov_2.362416_g23983_i0 | PRJEB39643 | 24176 | 371 | 2.362416 | 8.76456336 | Aliarcobacter butzleri | 28197 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|2305706618|gb|CP104378.1| | 28197 | g23983 | i0 | 97.059 | 0.091644204851752 | 34 | 0 | 9 | 1 | 309 | 341 | 1383360 | 1383327 | Aliarcobacter butzleri strain P1100 chromosome, complete genome | blastn | 34 | 56.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter butzleri | ||
| 19183589 | 19183589 | PRJEB39643_P_NODE_43476_length_290_cov_1.419355_g43283_i0 | PRJEB39643 | 43476 | 290 | 1.419355 | 4.1161295 | Campylobacter concisus | 199 | Bacteria | Bacteria | 520 | 6.119999999999998e-143 | NTclustered | gi|1938724023|gb|CP060707.1| | 199 | g43283 | i0 | 98.966 | 22.0551724137931 | 290 | 3 | 100 | 0 | 1 | 290 | 1565003 | 1565292 | Campylobacter concisus strain P1CDO2 chromosome, complete genome | blastn | 6396 | 520 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 19183631 | 19183631 | PRJEB39643_P_NODE_47776_length_287_cov_1.439252_g47583_i0 | PRJEB39643 | 47776 | 287 | 1.439252 | 4.13065324 | Campylobacter rectus | 203 | Bacteria | Bacteria | 525 | 1.2999999999999995e-144 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g47583 | i0 | 99.652 | 54.4285714285714 | 287 | 1 | 100 | 0 | 1 | 287 | 1486043 | 1485757 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 15621 | 525 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 19183695 | 19183695 | PRJEB39643_P_NODE_53616_length_284_cov_1.459716_g53423_i0 | PRJEB39643 | 53616 | 284 | 1.459716 | 4.14559344 | Campylobacter concisus | 199 | Bacteria | Bacteria | 520 | 5.98e-143 | NTclustered | gi|1063302220|gb|CP000792.2| | 360104 | g53423 | i0 | 99.648 | 88.830985915493 | 284 | 1 | 100 | 0 | 1 | 284 | 1162338 | 1162621 | Campylobacter concisus 13826 chromosome, complete genome | blastn | 25228 | 520 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 20116124 | 20116124 | PRJEB39643_P_NODE_82156_length_270_cov_1.563452_g81963_i0 | PRJEB39643 | 82156 | 270 | 1.563452 | 4.2213204 | root | 1 | Root_unresolved | Root_unresolved | 438 | 1.6299999999999993e-118 | NTclustered | gi|1376251231|gb|CP021642.1| | 199 | g81963 | i0 | 96.255 | 9.9037037037037 | 267 | 10 | 99 | 0 | 2 | 268 | 862959 | 863225 | Campylobacter concisus strain P2CDO4 chromosome, complete genome | blastn | 2674 | 438 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 20458343 | 20458343 | PRJEB39643_P_NODE_144737_length_243_cov_1.811765_g144544_i0 | PRJEB39643 | 144737 | 243 | 1.811765 | 4.40258895 | Campylobacter concisus | 199 | Bacteria | Bacteria | 399 | 6.789999999999999e-107 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g144544 | i0 | 96.296 | 17 | 243 | 9 | 100 | 0 | 1 | 243 | 1145140 | 1145382 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 4131 | 399 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 20458604 | 20458604 | PRJEB39643_P_NODE_23557_length_376_cov_1.524752_g23364_i0 | PRJEB39643 | 23557 | 376 | 1.524752 | 5.73306752 | Campylobacter concisus | 199 | Bacteria | Bacteria | 628 | 1.2999999999999994e-175 | NTclustered | gi|1938730527|gb|CP049274.1| | 199 | g23364 | i0 | 96.809 | 17.9441489361702 | 376 | 12 | 100 | 0 | 1 | 376 | 389757 | 390132 | Campylobacter concisus strain P10CDO-S2 chromosome, complete genome | blastn | 6747 | 628 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 20459254 | 20459254 | PRJEB39643_P_NODE_81397_length_270_cov_1.563452_g81204_i0 | PRJEB39643 | 81397 | 270 | 1.563452 | 4.2213204 | Campylobacter concisus | 199 | Bacteria | Bacteria | 488 | 1.5899999999999995e-133 | NTclustered | gi|2700477995|gb|CP147775.1| | 199 | g81204 | i0 | 99.259 | 98.8592592592593 | 270 | 2 | 100 | 0 | 1 | 270 | 421221 | 421490 | Campylobacter concisus strain RMIT-O23 chromosome | blastn | 26692 | 488 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 21735270 | 21735270 | PRJEB39643_P_NODE_90038_length_266_cov_1.595855_g89845_i0 | PRJEB39643 | 90038 | 266 | 1.595855 | 4.2449743 | Campylobacter showae | 204 | Bacteria | Bacteria | 464 | 2.64e-126 | NTclustered | gi|1483583558|emb|LT631482.1| | 204 | g89845 | i0 | 98.12 | 20.8872180451128 | 266 | 5 | 100 | 0 | 1 | 266 | 494 | 229 | Campylobacter showae strain B91_TPP genome assembly, chromosome: I | blastn | 5556 | 464 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 22666387 | 22666387 | PRJEB39643_P_NODE_4558_length_976_cov_13.891473_g4438_i0 | PRJEB39643 | 4558 | 976 | 13.891473 | 135.58077648 | Campylobacter | 194 | Bacteria | Bacteria | 54.7 | 0.027 | NTclustered | gi|2198377002|gb|CP059597.1| | 1032242 | g4438 | i0 | 100 | 0.220286885245902 | 29 | 0 | 3 | 0 | 323 | 351 | 490888 | 490916 | Campylobacter molothri strain RM10537 chromosome, complete genome | blastn | 215 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter molothri | ||
| 23009266 | 23009266 | PRJEB39643_P_NODE_111179_length_256_cov_1.683060_g110986_i0 | PRJEB39643 | 111179 | 256 | 1.68306 | 4.3086336 | Campylobacter rectus | 203 | Bacteria | Bacteria | 457 | 4.22e-124 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g110986 | i0 | 98.828 | 9.35546875 | 256 | 3 | 100 | 0 | 1 | 256 | 985451 | 985196 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 2395 | 457 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 23010363 | 23010363 | PRJEB39643_P_NODE_72839_length_274_cov_1.532338_g72646_i0 | PRJEB39643 | 72839 | 274 | 1.532338 | 4.19860612 | Campylobacter showae | 204 | Bacteria | Bacteria | 501 | 2.08e-137 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g72646 | i0 | 99.635 | 11.0948905109489 | 274 | 1 | 100 | 0 | 1 | 274 | 2089723 | 2089450 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 3040 | 501 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 23941749 | 23941749 | PRJEB39643_P_NODE_18699_length_423_cov_1.100000_g18506_i0 | PRJEB39643 | 18699 | 423 | 1.1 | 4.653 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.041 | NTclustered | gi|34483186|emb|BX571660.1| | 844 | g18506 | i0 | 100 | 0.198581560283688 | 28 | 0 | 7 | 0 | 1 | 28 | 85151 | 85178 | Wolinella succinogenes, complete genome; segment 4/7 | blastn | 84 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 24284271 | 24284271 | PRJEB39643_P_NODE_83240_length_269_cov_1.571429_g83047_i0 | PRJEB39643 | 83240 | 269 | 1.571429 | 4.22714401 | Campylobacter concisus | 199 | Bacteria | Bacteria | 448 | 2.6899999999999995e-121 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g83047 | i0 | 96.654 | 23.2007434944238 | 269 | 9 | 100 | 0 | 1 | 269 | 1693140 | 1693408 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 6241 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 24284382 | 24284382 | PRJEB39643_P_NODE_92780_length_265_cov_1.520833_g92587_i0 | PRJEB39643 | 92780 | 265 | 1.520833 | 4.03020745 | Campylobacter showae | 204 | Bacteria | Bacteria | 407 | 4.49e-109 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g92587 | i0 | 94.34 | 12.7811320754717 | 265 | 15 | 100 | 0 | 1 | 265 | 219812 | 219548 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 3387 | 407 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 24284387 | 24284387 | PRJEB39643_P_NODE_93180_length_264_cov_1.612565_g92987_i0 | PRJEB39643 | 93180 | 264 | 1.612565 | 4.2571716 | Campylobacter showae | 204 | Bacteria | Bacteria | 473 | 4.3399999999999986e-129 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g92987 | i0 | 99.614 | 31.9545454545455 | 259 | 1 | 98 | 0 | 1 | 259 | 1655480 | 1655738 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 8436 | 473 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 27633837 | 27633837 | PRJEB39643_P_NODE_98564_length_262_cov_1.629630_g98371_i0 | PRJEB39643 | 98564 | 262 | 1.62963 | 4.2696306 | Sulfuricurvum sp. | 2025608 | Bacteria | Bacteria | 69.7 | 1.48e-11 | NR | WP_329657453.1 | 2025608 | g98371 | i0 | 51.3 | 0.893129770992366 | 78 | 36 | 89.3 | 1 | 256 | 23 | 406 | 481 | WP_329657453.1 efflux transporter outer membrane subunit [Sulfuricurvum sp.] | diamond | 234 | 69.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Sulfuricurvum sp. | ||
| 28511159 | 28511159 | PRJEB39643_P_NODE_159007_length_210_cov_5.503650_g158813_i0 | PRJEB39643 | 159007 | 210 | 5.50365 | 11.557665 | Sulfuricurvum | 286130 | Bacteria | Bacteria | 119 | 3.61e-29 | NR | WP_299938567.1 | 2025608 | g158813 | i0 | 78.3 | 1.97142857142857 | 69 | 15 | 98.6 | 0 | 208 | 2 | 48 | 116 | WP_299938567.1 efflux RND transporter permease subunit [Sulfuricurvum sp.] | diamond | 414 | 120 | 0.991666666666667 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Sulfuricurvum sp. | ||
| 29111151 | 29111151 | PRJEB39643_P_NODE_120008_length_252_cov_1.720670_g119815_i0 | PRJEB39643 | 120008 | 252 | 1.72067 | 4.3360884 | Bacteria | 2 | Bacteria | Bacteria | 62.8 | 9.55e-11 | NR | GAA8948737.1 | 210 | g119815 | i0 | 66 | 1.08333333333333 | 50 | 16 | 59.5 | 1 | 3 | 152 | 8 | 56 | GAA8948737.1 hypothetical protein Kyoto181A_0640 [Helicobacter pylori] | diamond | 273 | 63.2 | 0.993670886075949 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29489775 | 29489775 | PRJEB39643_P_NODE_29410_length_339_cov_3.360902_g29217_i0 | PRJEB39643 | 29410 | 339 | 3.360902 | 11.39345778 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 179 | 5.619999999999999e-55 | NR | MCH3765027.1 | 195 | g29217 | i0 | 90.2 | 2.97345132743363 | 112 | 8 | 99.1 | 2 | 3 | 338 | 37 | 145 | MCH3765027.1 hypothetical protein [Campylobacter coli] | diamond | 1008 | 179 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 29685688 | 29685688 | PRJEB39643_P_NODE_78450_length_271_cov_1.924242_g78257_i0 | PRJEB39643 | 78450 | 271 | 1.924242 | 5.21469582 | Helicobacter pylori | 210 | Bacteria | Bacteria | 108 | 8.9e-29 | NR | GAA9165282.1 | 210 | g78257 | i0 | 94.2 | 0.575645756457565 | 52 | 3 | 57.6 | 0 | 18 | 173 | 1 | 52 | GAA9165282.1 hypothetical protein Kyoto190A_5390 [Helicobacter pylori] | diamond | 156 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29812100 | 29812100 | PRJEB39643_P_NODE_127671_length_249_cov_1.750000_g127478_i0 | PRJEB39643 | 127671 | 249 | 1.75 | 4.3575 | Campylobacter concisus | 199 | Bacteria | Bacteria | 134 | 3.98e-35 | NR | WP_181001734.1 | 199 | g127478 | i0 | 79.5 | 1 | 83 | 16 | 98.8 | 1 | 246 | 1 | 19 | 101 | WP_181001734.1 mobilization protein [Campylobacter concisus] | diamond | 249 | 134 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 30475826 | 30475826 | PRJEB39643_P_NODE_133533_length_247_cov_1.770115_g133340_i0 | PRJEB39643 | 133533 | 247 | 1.770115 | 4.37218405 | uncultured Campylobacter sp. | 218934 | Bacteria | Bacteria | 146 | 7.479999999999997e-42 | NR | WP_295141220.1 | 218934 | g133340 | i0 | 93.9 | 0.995951417004049 | 82 | 5 | 99.6 | 0 | 246 | 1 | 142 | 223 | WP_295141220.1 hypothetical protein [uncultured Campylobacter sp.] | diamond | 246 | 146 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | uncultured Campylobacter sp. | ||
| 30570205 | 30570205 | PRJEB39643_P_NODE_110753_length_256_cov_1.683060_g110560_i0 | PRJEB39643 | 110753 | 256 | 1.68306 | 4.3086336 | Campylobacter concisus | 199 | Bacteria | Bacteria | 176 | 6.5999999999999986e-49 | NR | MBS6287164.1 | 199 | g110560 | i0 | 95.3 | 0.99609375 | 85 | 4 | 99.6 | 0 | 256 | 2 | 712 | 796 | MBS6287164.1 hypothetical protein [Campylobacter concisus] | diamond | 255 | 176 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 31518832 | 31518832 | PRJEB39643_P_NODE_133656_length_247_cov_1.770115_g133463_i0 | PRJEB39643 | 133656 | 247 | 1.770115 | 4.37218405 | Campylobacter concisus | 199 | Bacteria | Bacteria | 107 | 5.15e-26 | NR | MBF0928657.1 | 199 | g133463 | i0 | 98.2 | 1.33603238866397 | 55 | 1 | 66.8 | 0 | 1 | 165 | 272 | 326 | MBF0928657.1 C4-dicarboxylate transporter DcuC [Campylobacter concisus] | diamond | 330 | 107 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 31708476 | 31708476 | PRJEB39643_P_NODE_15897_length_463_cov_2.479487_g15705_i0 | PRJEB39643 | 15897 | 463 | 2.479487 | 11.48002481 | Candidatus Sulfurimonas baltica | 2740404 | Bacteria | Bacteria | 51.6 | 1.25e-4 | NR | WP_194368918.1 | 2740404 | g15705 | i0 | 48.9 | 0.660907127429806 | 45 | 23 | 29.2 | 0 | 209 | 75 | 146 | 190 | WP_194368918.1 tetratricopeptide repeat protein [Candidatus Sulfurimonas baltica] | diamond | 306 | 51.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Candidatus Sulfurimonas baltica | ||
| 32119932 | 32119932 | PRJEB39643_P_NODE_2558_length_1237_cov_11.766323_g2467_i0 | PRJEB39643 | 2558 | 1237 | 11.766323 | 145.54941551 | Sulfuricurvum sp. | 2025608 | Bacteria | Bacteria | 77.4 | 4.05e-12 | NR | WP_299936147.1 | 2025608 | g2467 | i0 | 33.7 | 1.06709781729992 | 104 | 69 | 25.2 | 0 | 911 | 600 | 36 | 139 | WP_299936147.1 class I SAM-dependent methyltransferase [Sulfuricurvum sp.] | diamond | 1320 | 77.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Sulfuricurvum sp. | ||
| 32303315 | 32303315 | PRJEB39643_P_NODE_93099_length_264_cov_2.198953_g92906_i0 | PRJEB39643 | 93099 | 264 | 2.198953 | 5.80523592 | Bacteria | 2 | Bacteria | Bacteria | 136 | 1.4e-39 | NR | MCH3756027.1 | 195 | g92906 | i0 | 100 | 1.63636363636364 | 72 | 0 | 81.8 | 0 | 262 | 47 | 25 | 96 | MCH3756027.1 MucR family transcriptional regulator [Campylobacter coli] | diamond | 432 | 136 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 32341538 | 32341538 | PRJEB39643_P_NODE_97739_length_262_cov_1.629630_g97546_i0 | PRJEB39643 | 97739 | 262 | 1.62963 | 4.2696306 | Helicobacter pylori | 210 | Bacteria | Bacteria | 67 | 1.04e-12 | NR | GAA6795254.1 | 210 | g97546 | i0 | 59.2 | 2.8969465648855 | 49 | 19 | 56.1 | 1 | 48 | 194 | 2 | 49 | GAA6795254.1 hypothetical protein Kyoto200A_0170 [Helicobacter pylori] | diamond | 759 | 67 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32398060 | 32398060 | PRJEB39643_P_NODE_39439_length_299_cov_1.938053_g39246_i0 | PRJEB39643 | 39439 | 299 | 1.938053 | 5.79477847 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 148 | 1.27e-40 | NR | WP_294892330.1 | 1537917 | g39246 | i0 | 71.7 | 8.91973244147157 | 99 | 28 | 99.3 | 0 | 3 | 299 | 44 | 142 | WP_294892330.1 efflux RND transporter permease subunit, partial [Sulfuricurvum sp. MLSB] | diamond | 2667 | 148 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Sulfuricurvum sp. MLSB | ||
| 32720281 | 32720281 | PRJEB39643_P_NODE_67500_length_277_cov_1.509804_g67307_i0 | PRJEB39643 | 67500 | 277 | 1.509804 | 4.18215708 | Campylobacter concisus | 199 | Bacteria | Bacteria | 156 | 2.6e-44 | NR | MBS6286247.1 | 199 | g67307 | i0 | 96 | 0.812274368231047 | 75 | 3 | 81.2 | 0 | 53 | 277 | 1 | 75 | MBS6286247.1 LPXTG cell wall anchor domain-containing protein [Campylobacter concisus] | diamond | 225 | 156 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;