RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB39643", tax_kingdom = "Promethearchaeati" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

tax_kingdom 1

  • Promethearchaeati · 1 ✖

bioproject 1

  • PRJEB39643 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30412861 30412861 PRJEB39643_P_NODE_34373_length_317_cov_2.622951_g34180_i0 PRJEB39643 34373 317 2.622951 8.31475467 Candidatus Njordarchaeum guaymasense 3036989 Archaea Archaea 51.2 9.18e-5   NR MEX2689944.1 3036989 g34180 i0 52.5 0.378548895899054 40 19 37.9 0 5 124 409 448 MEX2689944.1 protein kinase [Candidatus Njordarchaeum guaymaensis] diamond 120 51.2 1 Archaea   Promethearchaeati Candidatus Njordarchaeota Candidatus Njordarchaeia Candidatus Njordarchaeales Candidatus Njordarchaeaceae Candidatus Njordarchaeum Candidatus Njordarchaeum guaymasense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;