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contig_metadata

8 rows where bioproject = "PRJEB39643" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

bioproject 1

  • PRJEB39643 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3883261 3883261 PRJEB39643_P_NODE_101904_length_260_cov_1.647059_g101711_i0 PRJEB39643 101904 260 1.647059 4.2823534 Natrinema caseinilyticum 2961570 Archaea Archaea 54.7 0.007   NTclustered gi|2270264148|gb|CP100445.1| 2961570 g101711 i0 96.875 0.123076923076923 32 1 12 0 177 208 2004064 2004033 Natrinema caseinilyticum strain ZJ2 chromosome, complete genome blastn 32 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema caseinilyticum
7710826 7710826 PRJEB39643_P_NODE_7727_length_732_cov_3.060698_g7559_i0 PRJEB39643 7727 732 3.060698 22.40430936 Methanobacterium sp. BRmetb2 2025350 Archaea Archaea 54.7 0.02   NTclustered gi|1473087786|gb|CP022705.1| 2025350 g7559 i0 94.444 0.0491803278688525 36 1 5 1 439 473 861936 861901 MAG: Methanobacterium sp. BRmetb2 chromosome, complete genome blastn 36 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. BRmetb2
18841296 18841296 PRJEB39643_P_NODE_99015_length_262_cov_1.629630_g98822_i0 PRJEB39643 99015 262 1.62963 4.2696306 root 1 Root_unresolved Root_unresolved 54.7 0.007   NTclustered gi|452081962|emb|HF582854.1| 268739 g98822 i0 100 0.248091603053435 29 0 11 0 169 197 1774954 1774926 Natronomonas moolapensis 8.8.11 complete genome blastn 65 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas moolapensis
19182856 19182856 PRJEB39643_P_NODE_122776_length_251_cov_1.730337_g122583_i0 PRJEB39643 122776 251 1.730337 4.34314587 Haloplanus halophilus 2949993 Archaea Archaea 52.8 0.023   NTclustered gi|2252468249|gb|CP098514.1| 2949993 g122583 i0 100 0.111553784860558 28 0 11 0 142 169 2469130 2469103 Haloplanus sp. GDY1 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus halophilus
27406273 27406273 PRJEB39643_P_NODE_16943_length_445_cov_9.193548_g16750_i0 PRJEB39643 16943 445 9.193548 40.9112886 Archaea 2157 Archaea Archaea 85.9 4.29e-18   NR HXQ49019.1 1906666 g16750 i0 38 2.83820224719101 137 82 91 2 425 21 12 147 HXQ49019.1 universal stress protein [Thermoplasmata archaeon] diamond 1263 85.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27690589 27690589 PRJEB39643_P_NODE_6204_length_835_cov_3.692913_g6055_i0 PRJEB39643 6204 835 3.692913 30.83582355 Methanosphaera 2316 Archaea Archaea 45.8 0.0299   NR WP_288652866.1 262501 g6055 i0 30.6 0.610778443113772 85 53 30.2 2 541 792 51 130 WP_288652866.1 hypothetical protein [uncultured Methanosphaera sp.] diamond 510 45.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera uncultured Methanosphaera sp.
28170450 28170450 PRJEB39643_P_NODE_30466_length_334_cov_2.360153_g30273_i0 PRJEB39643 30466 334 2.360153 7.88291102 Euryarchaeota archaeon RBG_19FT_COMBO_69_17 1797984 Archaea Archaea 43.9 0.0337   NR OGS63404.1 1797984 g30273 i0 62.5 0.287425149700599 32 11 28.7 1 301 206 55 85 OGS63404.1 MAG: hypothetical protein A3K59_06110 [Euryarchaeota archaeon RBG_19FT_COMBO_69_17] diamond 96 43.9 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_19FT_COMBO_69_17
30949794 30949794 PRJEB39643_P_NODE_128654_length_249_cov_1.312500_g128461_i0 PRJEB39643 128654 249 1.3125 3.268125 Methanobrevibacter sp. DSM 116169 3242727 Archaea Archaea 53.1 8.98e-6   NR WP_409199671.1 3242727 g128461 i0 46.6 0.879518072289157 73 32 81.9 3 222 19 218 288 WP_409199671.1 C1 family peptidase [Methanobrevibacter sp. DSM 116169] diamond 219 53.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. DSM 116169

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;