RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB39643", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB39643 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2607919 2607919 PRJEB39643_P_NODE_39423_length_299_cov_2.035398_g39230_i0 PRJEB39643 39423 299 2.035398 6.08584002 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 149 1.98e-39   NR PJF19132.1 1246581 g39230 i0 71.7 0.993311036789298 99 28 99.3 0 1 297 98 196 PJF19132.1 Double Clp-N motif domain-containing protein [Paramicrosporidium saccamoebae] diamond 297 149 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
17909400 17909400 PRJEB39643_P_NODE_25015_length_365_cov_2.767123_g24822_i0 PRJEB39643 25015 365 2.7671230000000002 10.09999895 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 224 6.45e-66   NR PJF19132.1 1246581 g24822 i0 90.9 0.994520547945206 121 11 99.5 0 3 365 609 729 PJF19132.1 Double Clp-N motif domain-containing protein [Paramicrosporidium saccamoebae] diamond 363 224 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
28770270 28770270 PRJEB39643_P_NODE_160247_length_197_cov_4.016129_g160053_i0 PRJEB39643 160247 197 4.016129 7.91177413 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 126 8.25e-32   NR PJF19132.1 1246581 g160053 i0 92.3 0.989847715736041 65 5 99 0 196 2 318 382 PJF19132.1 Double Clp-N motif domain-containing protein [Paramicrosporidium saccamoebae] diamond 195 126 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30538878 30538878 PRJEB39643_P_NODE_14893_length_482_cov_13.066015_g14702_i0 PRJEB39643 14893 482 13.066015 62.9781923 Rozella allomycis CSF55 988480 Fungi Fungi 172 6.439999999999999e-52   NR EPZ34940.1 988480 g14702 i0 54.5 4.37551867219917 145 66 90.2 0 467 33 2 146 EPZ34940.1 40S ribosomal protein S19-A [Rozella allomycis CSF55] diamond 2109 172 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30633519 30633519 PRJEB39643_P_NODE_26873_length_353_cov_3.835714_g26680_i0 PRJEB39643 26873 353 3.835714 13.54007042 Rozella allomycis CSF55 988480 Fungi Fungi 193 9.7e-57   NR EPZ31141.1 988480 g26680 i0 80.7 8.58356940509915 114 22 96.9 0 343 2 11 124 EPZ31141.1 V-type proton ATPase subunit B [Rozella allomycis CSF55] diamond 3030 193 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30854885 30854885 PRJEB39643_P_NODE_9554_length_640_cov_4.716049_g9374_i0 PRJEB39643 9554 640 4.716049 30.1827136 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 179 3.2499999999999993e-52   NR PJF16614.1 1246581 g9374 i0 67.9 2.5265625 140 45 65.6 0 1 420 89 228 PJF16614.1 40S ribosomal protein S6 [Paramicrosporidium saccamoebae] diamond 1617 179 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;