RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB39643", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB39643 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27949462 27949462 PRJEB39643_P_NODE_26765_length_354_cov_2.533808_g26572_i0 PRJEB39643 26765 354 2.533808 8.96968032 Armatimonadota bacterium 2033014 Bacteria Bacteria 143 1.4499999999999998e-37   NR MBM3474493.1 2033014 g26572 i0 54.2 2.02542372881356 118 53 100 1 354 1 329 445 MBM3474493.1 hydroxylamine reductase [Armatimonadota bacterium] diamond 717 143 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31265752 31265752 PRJEB39643_P_NODE_70135_length_275_cov_3.811881_g69942_i0 PRJEB39643 70135 275 3.811881 10.48267275 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.1 0.00252   NR UCH33022.1 2033014 g69942 i0 70.4 0.6 27 8 29.5 0 191 271 4 30 UCH33022.1 MAG: RNA-binding protein [Armatimonadota bacterium] diamond 165 45.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;