RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB39643", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJEB39643 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
58398 58398 PRJEB39643_P_NODE_77221_length_272_cov_1.547739_g77028_i0 PRJEB39643 77221 272 1.547739 4.20985008 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 442 1.2699999999999995e-119   NTclustered gi|2166243207|dbj|LC662976.1| 2528274 g77028 i0 95.956 2 272 11 100 0 1 272 3108 3379 Candidatus Tectomicrobia bacterium ARSSAG-00001703 DNA, putative prophage region, clone: 00001703_pp2 blastn 544 442 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
17567400 17567400 PRJEB39643_P_NODE_90374_length_266_cov_1.595855_g90181_i0 PRJEB39643 90374 266 1.595855 4.2449743 root 1 Root_unresolved Root_unresolved 401 2.0999999999999993e-107   NTclustered gi|2166243207|dbj|LC662976.1| 2528274 g90181 i0 93.985 2 266 15 100 1 1 266 10341 10605 Candidatus Tectomicrobia bacterium ARSSAG-00001703 DNA, putative prophage region, clone: 00001703_pp2 blastn 532 401 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
31354003 31354003 PRJEB39643_P_NODE_136796_length_246_cov_0.890173_g136603_i0 PRJEB39643 136796 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 47.4 8.74e-4   NR MBI5815465.1 2026769 g136603 i0 35.2 2.67073170731707 71 46 86.6 0 30 242 382 452 MBI5815465.1 tetratricopeptide repeat protein [Nitrospinota bacterium] diamond 657 47.4 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;