RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB39643", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 6 ✖

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJEB39643 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10260407 10260407 PRJEB39643_P_NODE_148329_length_241_cov_2.827381_g148136_i0 PRJEB39643 148329 241 2.827381 6.81398821 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.006   NTclustered gi|2794937985|ref|XM_067867157.1| 2049356 g148136 i0 100 0.352697095435685 29 0 12 0 116 144 7905 7933 Monocercomonoides exilis uncharacterized protein (MONOS_14360), partial mRNA blastn 85 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
19182953 19182953 PRJEB39643_P_NODE_1336_length_1516_cov_8.114345_g1281_i0 PRJEB39643 1336 1516 8.114345 123.0134702 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 0.003   NTclustered gi|2794943127|ref|XM_067867112.1| 2049356 g1281 i0 94.595 0.854221635883905 37 2 2 0 1228 1264 2974 2938 Monocercomonoides exilis putative PLK/PLK-UNCLASSIFIED protein kinase (MONOS_1432), partial mRNA blastn 1295 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26875473 26875473 PRJEB39643_P_NODE_152961_length_234_cov_3.950311_g152768_i0 PRJEB39643 152961 234 3.950311 9.24372774 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 45.1 0.00503   NR KAJ4458064.1 342808 g152768 i0 31.3 1.64102564102564 64 39 79.5 2 227 42 510 570 KAJ4458064.1 putative nucleoside phosphatase GDA1/CD39 [Paratrimastix pyriformis] diamond 384 45.1 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27001518 27001518 PRJEB39643_P_NODE_154882_length_228_cov_5.316129_g154689_i0 PRJEB39643 154882 228 5.316129 12.12077412 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 57 1.19e-7   NR KAJ4462014.1 342808 g154689 i0 57.5 2.57894736842105 40 17 52.6 0 107 226 40 79 KAJ4462014.1 putative H/ACA ribonucleoprotein complex subunit 1 [Paratrimastix pyriformis] diamond 588 57 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27033333 27033333 PRJEB39643_P_NODE_155522_length_227_cov_2.207792_g155329_i0 PRJEB39643 155522 227 2.207792 5.01168784 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 55.8 1.91e-7   NR KAJ4461579.1 342808 g155329 i0 37.5 0.951541850220264 72 44 95.2 1 2 217 80 150 KAJ4461579.1 hypothetical protein PAPYR_2178 [Paratrimastix pyriformis] diamond 216 55.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29559550 29559550 PRJEB39643_P_NODE_21290_length_394_cov_7.763240_g21097_i0 PRJEB39643 21290 394 7.76324 30.5871656 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 67 2.32e-11   NR KAJ4453711.1 342808 g21097 i0 51.6 0.487309644670051 64 29 48.7 1 372 181 4 65 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 192 67 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;