RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB39643", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJEB39643 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29622386 29622386 PRJEB39643_P_NODE_29290_length_340_cov_2.209738_g29097_i0 PRJEB39643 29290 340 2.209738 7.5131092 Fidelibacterota bacterium 2026760 Bacteria Bacteria 44.3 0.0123   NR MDC1038336.1 2026760 g29097 i0 46.5 0.379411764705882 43 23 37.9 0 97 225 12 54 MDC1038336.1 SufE family protein [Fidelibacterota bacterium] diamond 129 44.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31582151 31582151 PRJEB39643_P_NODE_48636_length_287_cov_1.439252_g48443_i0 PRJEB39643 48636 287 1.439252 4.13065324 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42 0.0171   NR HDP67500.1 2026760 g48443 i0 47.2 0.376306620209059 36 19 37.6 0 233 126 3 38 HDP67500.1 tetratricopeptide repeat protein [Fidelibacterota bacterium] diamond 108 42 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;