RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB39643", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB39643 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28801694 28801694 PRJEB39643_P_NODE_140988_length_244_cov_1.801170_g140795_i0 PRJEB39643 140988 244 1.80117 4.3948548 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 68.6 3.13e-11   NR HYC53676.1 2838779 g140795 i0 50.6 1.04508196721311 85 37 99.6 4 2 244 733 816 HYC53676.1 hypothetical protein [Candidatus Binatia bacterium] diamond 255 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29685704 29685704 PRJEB39643_P_NODE_95670_length_263_cov_1.621053_g95477_i0 PRJEB39643 95670 263 1.621053 4.26336939 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 70.1 6.16e-12   NR HET8563250.1 2838779 g95477 i0 48.1 0.901140684410646 79 36 89 2 261 28 215 289 HET8563250.1 APC family permease [Candidatus Binatia bacterium] diamond 237 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31961518 31961518 PRJEB39643_P_NODE_30978_length_332_cov_1.783784_g30785_i0 PRJEB39643 30978 332 1.783784 5.92216288 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 99 1.14e-21   NR MFN2374985.1 2838779 g30785 i0 47.9 1.07530120481928 119 47 99.4 5 332 3 263 375 MFN2374985.1 ice-binding family protein [Candidatus Binatia bacterium] diamond 357 99 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;