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contig_metadata

11 rows where bioproject = "PRJEB39269" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJEB39269 · 11 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1331363 1331363 PRJEB39269_P_NODE_60842_length_177_cov_1.347826_g60437_i0 PRJEB39269 60842 177 1.347826 2.38565202 Desulfobacter hydrogenophilus 2291 Bacteria Bacteria 90.1 1.5300000000000002e-21   NR WP_282959083.1 2291 g60437 i0 98 0.830508474576271 49 1 83.1 0 148 2 1 49 WP_282959083.1 histidine kinase dimerization/phospho-acceptor domain-containing protein, partial [Desulfobacter hydrogenophilus] diamond 147 90.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacter Desulfobacter hydrogenophilus
27665386 27665386 PRJEB39269_P_NODE_87604_length_153_cov_1.078947_g87199_i0 PRJEB39269 87604 153 1.078947 1.65078891 Geobacteraceae bacterium 2282154 Bacteria Bacteria 107 1.8e-25   NR HEX2769741.1 2282154 g87199 i0 92 2.94117647058824 50 4 98 0 152 3 384 433 HEX2769741.1 oleate hydratase [Geobacteraceae bacterium] diamond 450 107 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
28517774 28517774 PRJEB39269_P_NODE_26247_length_272_cov_2.064378_g25842_i0 PRJEB39269 26247 272 2.064378 5.61510816 Geobacteraceae bacterium 2282154 Bacteria Bacteria 56.6 6.77e-7   NR HEX2769741.1 2282154 g25842 i0 93.1 1.27941176470588 29 2 32 0 186 272 1 29 HEX2769741.1 oleate hydratase [Geobacteraceae bacterium] diamond 348 56.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
28864976 28864976 PRJEB39269_P_NODE_90428_length_151_cov_1.098214_g90023_i0 PRJEB39269 90428 151 1.098214 1.65830314 Desulfuromonadaceae bacterium 2099677 Bacteria Bacteria 56.2 1.77e-7   NR NLC72002.1 2099677 g90023 i0 52.2 1.82781456953642 46 22 91.4 0 140 3 486 531 NLC72002.1 amino acid adenylation domain-containing protein [Desulfuromonadaceae bacterium] diamond 276 56.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae   Desulfuromonadaceae bacterium
29149579 29149579 PRJEB39269_P_NODE_79549_length_159_cov_1.508333_g79144_i0 PRJEB39269 79549 159 1.508333 2.39824947 Nitratidesulfovibrio vulgaris 881 Bacteria Bacteria 45.1 0.00162   NR WCB48149.1 881 g79144 i0 44 1.75471698113208 50 28 94.3 0 154 5 58 107 WCB48149.1 DotG/IcmE/VirB10 family protein [Nitratidesulfovibrio vulgaris] diamond 279 45.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Nitratidesulfovibrio Nitratidesulfovibrio vulgaris
29559499 29559499 PRJEB39269_P_NODE_34250_length_236_cov_1.436548_g33845_i0 PRJEB39269 34250 236 1.436548 3.39025328 Desulfovibrio sp. JC 885 Bacteria Bacteria 47 4.07e-4   NR WP_163350893.1 2593641 g33845 i0 32.5 0.978813559322034 77 48 97.9 4 5 235 67 139 WP_163350893.1 type IV pilus biogenesis protein PilM [Desulfovibrio sp. JC010] diamond 231 47 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp. JC010
30785038 30785038 PRJEB39269_P_NODE_82854_length_156_cov_5.059829_g82449_i0 PRJEB39269 82854 156 5.059829 7.89333324 Pseudomonadati 3379134 Bacteria Bacteria 42.4 0.0153   NR WP_011736612.1 29543 g82449 i0 69.2 2.61538461538462 26 8 50 0 154 77 177 202 WP_011736612.1 glycosyltransferase [Pelobacter propionicus] diamond 408 42.7 0.992974238875878 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Pelobacter Pelobacter propionicus
31550549 31550549 PRJEB39269_P_NODE_72816_length_165_cov_1.301587_g72411_i0 PRJEB39269 72816 165 1.301587 2.14761855 Desulfurivibrio alkaliphilus 427923 Bacteria Bacteria 72.4 2.67e-13   NR WP_013164016.1 427923 g72411 i0 64.8 0.981818181818182 54 19 98.2 0 162 1 88 141 WP_013164016.1 NAD-dependent epimerase/dehydratase family protein [Desulfurivibrio alkaliphilus] diamond 162 72.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfurivibrio Desulfurivibrio alkaliphilus
31739925 31739925 PRJEB39269_P_NODE_75457_length_162_cov_1.821138_g75052_i0 PRJEB39269 75457 162 1.821138 2.95024356 Syntrophus sp. (in: bacteria) 48412 Bacteria Bacteria 55.1 5.41e-7   NR MEI7637697.1 48412 g75052 i0 48 1.87037037037037 50 26 92.6 0 161 12 677 726 MEI7637697.1 protein DpdF [Syntrophus sp. (in: bacteria)] diamond 303 55.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae Syntrophus Syntrophus sp. (in: bacteria)
32745178 32745178 PRJEB39269_P_NODE_86240_length_154_cov_1.165217_g85835_i0 PRJEB39269 86240 154 1.165217 1.79443418 Pseudomonadati 3379134 Bacteria Bacteria 65.5 1.06e-10   NR MBQ3060199.1 885 g85835 i0 62.7 16.8701298701299 51 19 99.4 0 154 2 262 312 MBQ3060199.1 TraM recognition domain-containing protein [Desulfovibrio sp.] diamond 2598 65.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
32751636 32751636 PRJEB39269_P_NODE_59560_length_179_cov_1.171429_g59155_i0 PRJEB39269 59560 179 1.171429 2.09685791 Maridesulfovibrio sp. 2795000 Bacteria Bacteria 83.2 8.76e-17   NR WP_320008771.1 2795000 g59155 i0 65.1 4.91061452513966 63 17 97.2 1 176 3 485 547 WP_320008771.1 S9 family peptidase [Maridesulfovibrio sp.] diamond 879 83.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Maridesulfovibrio Maridesulfovibrio sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;