RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB39269" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB39269 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
989213 989213 PRJEB39269_P_NODE_38881_length_220_cov_4.165746_g38476_i0 PRJEB39269 38881 220 4.165746 9.1646412 Fungi 4751 Fungi Fungi 390 3.629999999999999e-104   NTclustered gi|1768664880|emb|LR730779.1| 4876 g38476 i0 98.636 100 220 3 100 0 1 220 6 225 Rhizophagus intraradices 28S large subunit ribosomal RNA gene, partial sequence, isolate 067_A06_134 blastn 22000 390 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus intraradices
21391330 21391330 PRJEB39269_P_NODE_51177_length_192_cov_1.300654_g50772_i0 PRJEB39269 51177 192 1.300654 2.49725568 Mortierella 4855 Fungi Fungi 95.3 2.71e-15   NTclustered gi|411030762|gb|JX270228.1| 1253901 g50772 i0 90.541 58.1197916666667 74 4 38 3 1 73 186 115 Mortierella sp. 08CT03 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 11159 95.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. 08CT03
30318258 30318258 PRJEB39269_P_NODE_62172_length_175_cov_1.808824_g61767_i0 PRJEB39269 62172 175 1.808824 3.165442 Rhizomucor pusillus 4840 Fungi Fungi 45.1 0.0014   NR KAL1932413.1 4840 g61767 i0 54.8 0.72 42 19 72 0 134 9 103 144 KAL1932413.1 hypothetical protein VTP01DRAFT_9469 [Rhizomucor pusillus] diamond 126 45.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;