RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB39269" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB39269 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7366834 7366834 PRJEB39269_P_NODE_67446_length_170_cov_2.534351_g67041_i0 PRJEB39269 67446 170 2.534351 4.3083967 Pseudomonadati 3379134 Bacteria Bacteria 110 8.32e-20   NTclustered gi|2874253892|emb|OY970067.1| 991135 g67041 i0 91.25 17.8823529411765 80 7 47 0 1 80 4745666 4745745 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 3040 110 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
30690180 30690180 PRJEB39269_P_NODE_86473_length_154_cov_1.060870_g86068_i0 PRJEB39269 86473 154 1.06087 1.6337398 Pseudomonadati 3379134 Bacteria Bacteria 76.3 1.61e-14   NR HYL63392.1 2032687 g86068 i0 65.3 2.84415584415584 49 17 95.5 0 152 6 366 414 HYL63392.1 serine hydrolase [Candidatus Methylomirabilis sp.] diamond 438 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
30728417 30728417 PRJEB39269_P_NODE_91554_length_150_cov_1.333333_g91149_i0 PRJEB39269 91554 150 1.333333 1.9999995 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 87.8 4.88e-19   NR HTG30513.1 2072417 g91149 i0 74 3 50 13 100 0 1 150 69 118 HTG30513.1 polysaccharide deacetylase family protein [Candidatus Methylomirabilota bacterium] diamond 450 87.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;