contig_metadata
5 rows where bioproject = "PRJEB39269" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4817103 | 4817103 | PRJEB39269_P_NODE_28304_length_261_cov_3.752252_g27899_i0 | PRJEB39269 | 28304 | 261 | 3.752252 | 9.79337772 | Arcobacter | 28196 | Bacteria | Bacteria | 483 | 7.12e-132 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g27899 | i0 | 100 | 383.567049808429 | 261 | 0 | 100 | 0 | 1 | 261 | 1734550 | 1734290 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 100111 | 483 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis | ||
| 7709470 | 7709470 | PRJEB39269_P_NODE_727_length_1282_cov_13.806114_g199_i1 | PRJEB39269 | 727 | 1282 | 13.806114000000001 | 176.99438148 | Helicobacter canis | 29419 | Bacteria | Bacteria | 1055 | 0 | NTclustered | gi|50957149|gb|AY596234.1| | 29419 | g199 | i1 | 98.182 | 64.2784711388456 | 605 | 9 | 47 | 2 | 679 | 1282 | 1133 | 530 | Helicobacter canis strain ATCC 51401 23S ribosomal RNA gene, partial sequence | blastn | 82405 | 1055 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter canis | ||
| 20457923 | 20457923 | PRJEB39269_P_NODE_9537_length_450_cov_9.459854_g9134_i0 | PRJEB39269 | 9537 | 450 | 9.459854 | 42.569343 | Helicobacter canis | 29419 | Bacteria | Bacteria | 780 | 0 | NTclustered | gi|1721134163|emb|LR698964.1| | 29419 | g9134 | i0 | 97.996 | 139.337777777778 | 449 | 9 | 99 | 0 | 2 | 450 | 2467 | 2915 | Helicobacter canis isolate MGYG-HGUT-01463 genome assembly, chromosome: 1 | blastn | 62702 | 780 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter canis | ||
| 21391323 | 21391323 | PRJEB39269_P_NODE_20677_length_308_cov_4.970260_g20272_i0 | PRJEB39269 | 20677 | 308 | 4.97026 | 15.3084008 | Arcobacter | 28196 | Bacteria | Bacteria | 564 | 2.99e-156 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g20272 | i0 | 99.675 | 375.012987012987 | 308 | 1 | 100 | 0 | 1 | 308 | 1733015 | 1733322 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 115504 | 564 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis | ||
| 23941553 | 23941553 | PRJEB39269_P_NODE_36679_length_227_cov_4.739362_g36274_i0 | PRJEB39269 | 36679 | 227 | 4.739362 | 10.75835174 | Arcobacteraceae | 2808963 | Bacteria | Bacteria | 403 | 4.85e-108 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g36274 | i0 | 98.678 | 384.784140969163 | 227 | 3 | 100 | 0 | 1 | 227 | 1733904 | 1733678 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 87346 | 403 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;