contig_metadata
25 rows where bioproject = "PRJEB39269", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 989216 | 989216 | PRJEB39269_P_NODE_54521_length_186_cov_1.952381_g54116_i0 | PRJEB39269 | 54521 | 186 | 1.952381 | 3.63142866 | Gemmata | 113 | Bacteria | Bacteria | 278 | 2.41e-70 | NTclustered | gi|12583965|gb|AF245369.1|AF245369 | 114 | g54116 | i0 | 93.548 | 407.870967741935 | 186 | 12 | 100 | 0 | 1 | 186 | 1728 | 1543 | Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence | blastn | 75864 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 3883173 | 3883173 | PRJEB39269_P_NODE_32344_length_243_cov_1.877451_g31939_i0 | PRJEB39269 | 32344 | 243 | 1.877451 | 4.56220593 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 340 | 4.169999999999999e-89 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g31939 | i0 | 93.506 | 105.728395061728 | 231 | 12 | 94 | 3 | 15 | 243 | 7051659 | 7051430 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 25692 | 340 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 3883227 | 3883227 | PRJEB39269_P_NODE_81664_length_157_cov_3.966102_g81259_i0 | PRJEB39269 | 81664 | 157 | 3.966102 | 6.22678014 | Phycisphaera mikurensis | 547188 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|381385343|dbj|AP012338.1| | 1142394 | g81259 | i0 | 94.118 | 0.21656050955414 | 34 | 2 | 22 | 0 | 107 | 140 | 2049852 | 2049885 | Phycisphaera mikurensis NBRC 102666 DNA, complete genome | blastn | 34 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Phycisphaera mikurensis | |
| 4817097 | 4817097 | PRJEB39269_P_NODE_15264_length_359_cov_2.159375_g14859_i0 | PRJEB39269 | 15264 | 359 | 2.159375 | 7.75215625 | Planctomycetia | 203683 | Bacteria | Bacteria | 652 | 0 | NTclustered | gi|220682248|gb|FJ542855.1| | 100233 | g14859 | i0 | 99.443 | 96.5097493036212 | 359 | 2 | 100 | 0 | 1 | 359 | 6 | 364 | Uncultured Planctomycetaceae bacterium clone A04-09A 16S ribosomal RNA gene, partial sequence | blastn | 34647 | 652 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 5159378 | 5159378 | PRJEB39269_P_NODE_33985_length_237_cov_1.242424_g33580_i0 | PRJEB39269 | 33985 | 237 | 1.242424 | 2.94454488 | Polystyrenella longa | 2528007 | Bacteria | Bacteria | 344 | 3.13e-90 | NTclustered | gi|1712652806|gb|CP036281.1| | 2528007 | g33580 | i0 | 92.827 | 163.164556962025 | 237 | 17 | 100 | 0 | 1 | 237 | 1417758 | 1417994 | Polystyrenella longa strain Pla110 chromosome, complete genome | blastn | 38670 | 344 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Polystyrenella | Polystyrenella longa | |
| 5159379 | 5159379 | PRJEB39269_P_NODE_34865_length_234_cov_1.097436_g34460_i0 | PRJEB39269 | 34865 | 234 | 1.097436 | 2.56800024 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 300 | 6.78e-77 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g34460 | i0 | 89.873 | 45.517094017094 | 237 | 19 | 100 | 5 | 1 | 234 | 2002932 | 2003166 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 10651 | 300 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 6092337 | 6092337 | PRJEB39269_P_NODE_43785_length_207_cov_2.416667_g43380_i0 | PRJEB39269 | 43785 | 207 | 2.416667 | 5.00250069 | root | 1 | Root_unresolved | Root_unresolved | 333 | 5.779999999999999e-87 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g43380 | i0 | 95.694 | 169.033816425121 | 209 | 6 | 100 | 2 | 1 | 207 | 7051114 | 7050907 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 34990 | 335 | 0.994029850746269 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 9917427 | 9917427 | PRJEB39269_P_NODE_64448_length_172_cov_2.082707_g64043_i0 | PRJEB39269 | 64448 | 172 | 2.082707 | 3.58225604 | Lacipirellula | 2691417 | Bacteria | Bacteria | 272 | 1.02e-68 | NTclustered | gi|1712529062|gb|CP036339.1| | 2528024 | g64043 | i0 | 95.322 | 116.732558139535 | 171 | 8 | 99 | 0 | 1 | 171 | 5170678 | 5170508 | Lacipirellula limnantheis strain I41 chromosome | blastn | 20078 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula limnantheis | |
| 9917461 | 9917461 | PRJEB39269_P_NODE_80148_length_159_cov_0.941667_g79743_i0 | PRJEB39269 | 80148 | 159 | 0.941667 | 1.49725053 | Gimesia | 1649453 | Bacteria | Bacteria | 171 | 3.479999999999999e-38 | NTclustered | gi|1727531535|gb|CP042910.1| | 122 | g79743 | i0 | 86.164 | 177.465408805031 | 159 | 21 | 99 | 1 | 2 | 159 | 2184726 | 2184568 | Gimesia maris strain DSM 8797 chromosome, complete genome | blastn | 28217 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gimesia | Gimesia maris | |
| 10259871 | 10259871 | PRJEB39269_P_NODE_72389_length_165_cov_2.515873_g71984_i0 | PRJEB39269 | 72389 | 165 | 2.515873 | 4.15119045 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 283 | 4.4899999999999995e-72 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g71984 | i0 | 97.576 | 146.454545454545 | 165 | 4 | 100 | 0 | 1 | 165 | 320107 | 319943 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 24165 | 283 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 12810570 | 12810570 | PRJEB39269_P_NODE_27071_length_268_cov_1.248908_g26666_i0 | PRJEB39269 | 27071 | 268 | 1.248908 | 3.34707344 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 390 | 4.579999999999999e-104 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g26666 | i0 | 92.91 | 446.570895522388 | 268 | 19 | 100 | 0 | 1 | 268 | 2192424 | 2192157 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 119681 | 390 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 13742708 | 13742708 | PRJEB39269_P_NODE_60911_length_177_cov_1.188406_g60506_i0 | PRJEB39269 | 60911 | 177 | 1.188406 | 2.10347862 | Schlesneria | 656899 | Bacteria | Bacteria | 159 | 8.559999999999998e-35 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g60506 | i0 | 85.714 | 11.3050847457627 | 154 | 19 | 86 | 3 | 24 | 175 | 297 | 449 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 2001 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 13742738 | 13742738 | PRJEB39269_P_NODE_80271_length_158_cov_4.495798_g79866_i0 | PRJEB39269 | 80271 | 158 | 4.495798 | 7.10336084 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 55.1 | 1.71e-8 | NR | MFM2096802.1 | 2026780 | g79866 | i0 | 92.6 | 2.6962025316455702 | 27 | 2 | 51.3 | 0 | 82 | 2 | 6 | 32 | MFM2096802.1 Dihydrofolate reductase type 3 [Planctomycetota bacterium] | diamond | 426 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 14085345 | 14085345 | PRJEB39269_P_NODE_41452_length_213_cov_2.293103_g41047_i0 | PRJEB39269 | 41452 | 213 | 2.293103 | 4.88430939 | Aeoliella mucimassa | 2527972 | Bacteria | Bacteria | 339 | 1.28e-88 | NTclustered | gi|1712622222|gb|CP036278.1| | 2527972 | g41047 | i0 | 95.327 | 100.596244131455 | 214 | 8 | 99 | 2 | 1 | 212 | 2043834 | 2043621 | Aeoliella mucimassa strain Pan181 chromosome, complete genome | blastn | 21427 | 339 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Aeoliella | Aeoliella mucimassa | |
| 15359187 | 15359187 | PRJEB39269_P_NODE_10153_length_437_cov_2.361809_g9749_i0 | PRJEB39269 | 10153 | 437 | 2.361809 | 10.32110533 | Aeoliella mucimassa | 2527972 | Bacteria | Bacteria | 645 | 1.5199999999999993e-180 | NTclustered | gi|1712622222|gb|CP036278.1| | 2527972 | g9749 | i0 | 93.349 | 231.118993135011 | 436 | 29 | 99 | 0 | 2 | 437 | 2043036 | 2042601 | Aeoliella mucimassa strain Pan181 chromosome, complete genome | blastn | 100999 | 645 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Aeoliella | Aeoliella mucimassa | |
| 16633883 | 16633883 | PRJEB39269_P_NODE_13274_length_385_cov_1.901734_g12869_i0 | PRJEB39269 | 13274 | 385 | 1.901734 | 7.3216759 | Aeoliella mucimassa | 2527972 | Bacteria | Bacteria | 499 | 1.09e-136 | NTclustered | gi|1712622222|gb|CP036278.1| | 2527972 | g12869 | i0 | 97.279 | 219.955844155844 | 294 | 8 | 76 | 0 | 9 | 302 | 2043413 | 2043120 | Aeoliella mucimassa strain Pan181 chromosome, complete genome | blastn | 84683 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Aeoliella | Aeoliella mucimassa | |
| 18840927 | 18840927 | PRJEB39269_P_NODE_31675_length_246_cov_1.299517_g31270_i0 | PRJEB39269 | 31675 | 246 | 1.299517 | 3.19681182 | Schlesneria | 656899 | Bacteria | Bacteria | 219 | 2.07e-52 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g31270 | i0 | 90.116 | 71.719512195122 | 172 | 12 | 68 | 4 | 80 | 246 | 1511 | 1682 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 17643 | 219 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 19182544 | 19182544 | PRJEB39269_P_NODE_45916_length_202_cov_2.306748_g45511_i0 | PRJEB39269 | 45916 | 202 | 2.306748 | 4.65963096 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 248 | 2.09e-61 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g45511 | i0 | 88.78 | 157.668316831683 | 205 | 20 | 100 | 2 | 1 | 202 | 7051893 | 7052097 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 31849 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 20115749 | 20115749 | PRJEB39269_P_NODE_35596_length_231_cov_2.046875_g35191_i0 | PRJEB39269 | 35596 | 231 | 2.046875 | 4.72828125 | Planctomycetia | 203683 | Bacteria | Bacteria | 427 | 2.9399999999999998e-115 | NTclustered | gi|4775510|emb|AJ231182.1| | 79875 | g35191 | i0 | 100 | 100.021645021645 | 231 | 0 | 100 | 0 | 1 | 231 | 919 | 689 | planctomycete str. 292 16S rRNA gene, partial | blastn | 23105 | 427 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 292 | ||
| 20115786 | 20115786 | PRJEB39269_P_NODE_73896_length_164_cov_1.312000_g73491_i0 | PRJEB39269 | 73896 | 164 | 1.312 | 2.15168 | Schlesneria | 656899 | Bacteria | Bacteria | 169 | 1.3000000000000001e-37 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g73491 | i0 | 85.455 | 32.0731707317073 | 165 | 21 | 100 | 3 | 1 | 164 | 1415 | 1577 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 5260 | 169 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 27697146 | 27697146 | PRJEB39269_P_NODE_88684_length_152_cov_1.442478_g88279_i0 | PRJEB39269 | 88684 | 152 | 1.442478 | 2.19256656 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 66.2 | 5.43e-11 | NR | HSZ58344.1 | 2876886 | g88279 | i0 | 70.2 | 7.36184210526316 | 47 | 14 | 92.8 | 0 | 10 | 150 | 18 | 64 | HSZ58344.1 long-chain fatty acid--CoA ligase [Tepidisphaeraceae bacterium] | diamond | 1119 | 66.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 27823261 | 27823261 | PRJEB39269_P_NODE_66784_length_170_cov_3.083969_g66379_i0 | PRJEB39269 | 66784 | 170 | 3.083969 | 5.2427473000000004 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 50.4 | 1.44e-5 | NR | MBX3406412.1 | 2026777 | g66379 | i0 | 84.6 | 0.9 | 26 | 4 | 45.9 | 0 | 1 | 78 | 21 | 46 | MBX3406412.1 sigma-70 family RNA polymerase sigma factor [Phycisphaeraceae bacterium] | diamond | 153 | 50.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 28959957 | 28959957 | PRJEB39269_P_NODE_34248_length_236_cov_1.441624_g33843_i0 | PRJEB39269 | 34248 | 236 | 1.441624 | 3.40223264 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 45.1 | 0.00522 | NR | MBX3417541.1 | 2699754 | g33843 | i0 | 40.4 | 0.597457627118644 | 47 | 28 | 59.7 | 0 | 23 | 163 | 22 | 68 | MBX3417541.1 AMP-binding protein [Pirellulaceae bacterium] | diamond | 141 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 29117794 | 29117794 | PRJEB39269_P_NODE_52589_length_189_cov_3.213333_g52184_i0 | PRJEB39269 | 52589 | 189 | 3.213333 | 6.07319937 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.6 | 0.0478 | NR | HET6202587.1 | 2026780 | g52184 | i0 | 37.9 | 0.920634920634921 | 58 | 32 | 85.7 | 1 | 10 | 171 | 48 | 105 | HET6202587.1 glycosyltransferase [Planctomycetota bacterium] | diamond | 174 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31771683 | 31771683 | PRJEB39269_P_NODE_87137_length_153_cov_1.596491_g86732_i0 | PRJEB39269 | 87137 | 153 | 1.596491 | 2.44263123 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 51.2 | 1.14e-5 | NR | MEO2089549.1 | 2052164 | g86732 | i0 | 56.1 | 0.803921568627451 | 41 | 18 | 80.4 | 0 | 1 | 123 | 230 | 270 | MEO2089549.1 hypothetical protein [Gemmataceae bacterium] | diamond | 123 | 51.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;