RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB39269" and tax_clade = "Luna-1 subcluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJEB39269 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11192641 11192641 PRJEB39269_P_NODE_87469_length_153_cov_1.210526_g87064_i0 PRJEB39269 87469 153 1.210526 1.85210478 Rhodoluna 529883 Bacteria Bacteria 202 1.1799999999999998e-47   NTclustered gi|1666461687|gb|CP040509.1| 232537 g87064 i0 97.458 116.78431372549 118 3 77 0 36 153 476950 476833 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 17868 202 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
15359188 15359188 PRJEB39269_P_NODE_11633_length_410_cov_3.342318_g11228_i0 PRJEB39269 11633 410 3.342318 13.7035038 Aquiluna borgnonia 2499157 Bacteria Bacteria 503 9.05e-138   NTclustered gi|1850312474|gb|CP054056.1| 2499157 g11228 i0 88.862 187.065853658537 413 40 100 6 1 410 854978 854569 Aquiluna borgnonia strain 15G-AUS-rot chromosome, complete genome blastn 76697 503 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna borgnonia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;