RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJEB36940" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB36940 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8642171 8642171 PRJEB36940_P_NODE_11947_length_255_cov_1.906593_g11818_i0 PRJEB36940 11947 255 1.906593 4.8618121500000004 Metazoa 33208 Platyhelminthes Platyhelminthes 472 1.5e-128   NTclustered gi|60687563|gb|AY914894.1| 6182 g11818 i0 100 100 255 0 100 0 1 255 193 447 Schistosoma japonicum unknown mRNA blastn 25500 472 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
10259558 10259558 PRJEB36940_P_NODE_4109_length_421_cov_13.066092_g3980_i0 PRJEB36940 4109 421 13.066092 55.00824732 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 516 1.2e-141   NTclustered gi|68479954|gb|DQ076149.1| 6182 g3980 i0 88.863 1.00237529691211 422 44 99 3 1 420 12 432 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 422 516 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
20457667 20457667 PRJEB36940_P_NODE_6677_length_333_cov_3.680769_g6548_i0 PRJEB36940 6677 333 3.680769 12.25696077 Protopolystoma xenopodis 117903 Platyhelminthes Platyhelminthes 136 9.66e-38   NR VEL29129.1 117903 g6548 i0 76.3 15.018018018018 93 22 83.8 0 280 2 27 119 VEL29129.1 unnamed protein product [Protopolystoma xenopodis] diamond 5001 136 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Protopolystoma Protopolystoma xenopodis
30064793 30064793 PRJEB36940_P_NODE_10952_length_266_cov_1.398964_g10823_i0 PRJEB36940 10952 266 1.398964 3.72124424 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 45.4 0.00152   NR TNN04693.1 6182 g10823 i0 47.5 0.665413533834586 59 30 66.5 1 238 62 46 103 TNN04693.1 hypothetical protein EWB00_000461 [Schistosoma japonicum] diamond 177 45.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30444207 30444207 PRJEB36940_P_NODE_333_length_1294_cov_8.368550_g267_i0 PRJEB36940 333 1294 8.36855 108.289037 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 99.4 1.66e-18   NR PAA86220.1 282301 g267 i0 32.9 0.373261205564142 161 107 37.1 1 642 163 76 236 PAA86220.1 hypothetical protein BOX15_Mlig009159g3 [Macrostomum lignano] diamond 483 99.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
31929800 31929800 PRJEB36940_P_NODE_11137_length_264_cov_1.403141_g11008_i0 PRJEB36940 11137 264 1.403141 3.70429224 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 96.7 9.83e-23   NR KAL3320707.1 1844966 g11008 i0 50.6 0.988636363636364 87 43 98.9 0 263 3 67 153 KAL3320707.1 guanylate kinase [Cichlidogyrus casuarinus] diamond 261 96.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus
32088058 32088058 PRJEB36940_P_NODE_14698_length_245_cov_1.331395_g14569_i0 PRJEB36940 14698 245 1.331395 3.26191775 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 61.2 1.12e-8   NR PAA93605.1 282301 g14569 i0 40.8 0.930612244897959 76 40 93.1 1 244 17 373 443 PAA93605.1 hypothetical protein BOX15_Mlig031413g1 [Macrostomum lignano] diamond 228 61.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
32871025 32871025 PRJEB36940_P_NODE_11860_length_256_cov_1.699454_g11731_i0 PRJEB36940 11860 256 1.699454 4.35060224 Opisthorchiidae 6196 Platyhelminthes Platyhelminthes 50.4 4.87e-5   NR OON18388.1 6198 g11731 i0 43.3 3.2578125 67 37 78.5 1 201 1 26 91 OON18388.1 TB2/DP1, HVA22 family [Opisthorchis viverrini] diamond 834 50.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;