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contig_metadata

36 rows where bioproject = "PRJEB36940" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 36 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB36940 · 36 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
56870 56870 PRJEB36940_P_NODE_6101_length_347_cov_4.021898_g5972_i0 PRJEB36940 6101 347 4.021898 13.95598606 Pristionchus pauli 376545 Nematoda Nematoda 183 1.12e-41   NTclustered gi|150984443|gb|EF634864.1| 376545 g5972 i0 78.967 10.5734870317003 271 55 78 2 34 303 285 16 Pristionchus pauli small subunit ribosomal protein 8 (rps-8) mRNA, partial cds blastn 3669 183 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pauli
7709202 7709202 PRJEB36940_P_NODE_5807_length_356_cov_1.102473_g5678_i0 PRJEB36940 5807 356 1.102473 3.92480388 Metazoa 33208 Nematoda Nematoda 149 3.319999999999999e-43   NR KJH46452.1 29172 g5678 i0 63.2 6.48033707865169 114 42 96.1 0 10 351 23 136 KJH46452.1 copper/zinc superoxide dismutase [Dictyocaulus viviparus] diamond 2307 150 0.993333333333333 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus
9917185 9917185 PRJEB36940_P_NODE_4248_length_414_cov_4.853372_g4119_i0 PRJEB36940 4248 414 4.853372 20.09296008 Caenorhabditis brenneri 135651 Nematoda Nematoda 110 6.37e-28   NR EGT34536.1 135651 g4119 i0 57.9 2.06521739130435 95 40 68.8 0 123 407 40 134 EGT34536.1 hypothetical protein CAEBREN_26317 [Caenorhabditis brenneri] diamond 855 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
12810254 12810254 PRJEB36940_P_NODE_13411_length_249_cov_0.886364_g13282_i0 PRJEB36940 13411 249 0.886364 2.20704636 Strongyloides ratti 34506 Nematoda Nematoda 200 7.61e-47   NTclustered gi|1376147001|ref|XM_024654123.1| 34506 g13282 i0 82.759 10.1164658634538 232 32 92 6 19 246 295 522 Strongyloides ratti Catalase (SRAE_2000298400), partial mRNA blastn 2519 200 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
14085065 14085065 PRJEB36940_P_NODE_3172_length_477_cov_9.603960_g3045_i0 PRJEB36940 3172 477 9.60396 45.8108892 Aphelenchoides bicaudatus 293665 Nematoda Nematoda 190 7.9e-58   NR KAI6182696.1 293665 g3045 i0 64.2 3.69811320754717 148 53 93.1 0 444 1 15 162 KAI6182696.1 Ribosomal protein L1 domain containing protein [Aphelenchoides bicaudatus] diamond 1764 190 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
15358934 15358934 PRJEB36940_P_NODE_3893_length_432_cov_3.459610_g3764_i0 PRJEB36940 3893 432 3.45961 14.945515199999999 Pristionchus pauli 376545 Nematoda Nematoda 287 1.05e-72   NTclustered gi|150982019|gb|EF634598.1| 376545 g3764 i0 81.215 5.22222222222222 362 62 83 6 67 425 37 395 Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 2256 287 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pauli
26747987 26747987 PRJEB36940_P_NODE_14441_length_246_cov_0.901734_g14312_i0 PRJEB36940 14441 246 0.901734 2.21826564 Toxocara canis 6265 Nematoda Nematoda 62.8 3.39e-9   NR VDM44922.1 6265 g14312 i0 59.6 2.18292682926829 52 21 63.4 0 158 3 1312 1363 VDM44922.1 unnamed protein product [Toxocara canis] diamond 537 62.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
26805146 26805146 PRJEB36940_P_NODE_16161_length_238_cov_2.345455_g16032_i0 PRJEB36940 16161 238 2.345455 5.5821829 Metazoa 33208 Nematoda Nematoda 51.6 5.76e-6   NR CDW57102.1 36087 g16032 i0 46.3 3.11344537815126 54 26 68.1 1 197 36 1 51 CDW57102.1 leptin receptor protein [Trichuris trichiura] diamond 741 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
26843635 26843635 PRJEB36940_P_NODE_1061_length_812_cov_5.757781_g948_i0 PRJEB36940 1061 812 5.757781 46.75318172 Meloidogyne graminicola 189291 Nematoda Nematoda 111 3.93e-25   NR AVZ46778.1 189291 g948 i0 48.9 0.491379310344828 133 68 49.1 0 234 632 109 241 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 399 111 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
27159454 27159454 PRJEB36940_P_NODE_15942_length_242_cov_0.917160_g15813_i0 PRJEB36940 15942 242 0.91716 2.2195272 Gongylonema pulchrum 637853 Nematoda Nematoda 57.8 1.77e-7   NR VDN19521.1 637853 g15813 i0 68.4 0.471074380165289 38 11 45.9 1 1 111 75 112 VDN19521.1 unnamed protein product [Gongylonema pulchrum] diamond 114 57.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gongylonematidae Gongylonema Gongylonema pulchrum
27286180 27286180 PRJEB36940_P_NODE_6043_length_349_cov_17.634058_g5914_i0 PRJEB36940 6043 349 17.634058 61.54286242 Pristionchus fissidentatus 1538716 Nematoda Nematoda 128 7.67e-36   NR GMT14341.1 1538716 g5914 i0 65.6 1.59025787965616 93 31 79.9 1 328 50 7 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 555 128 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
27381169 27381169 PRJEB36940_P_NODE_3483_length_455_cov_13.277487_g3355_i0 PRJEB36940 3483 455 13.277487 60.41256585 Pristionchus fissidentatus 1538716 Nematoda Nematoda 90.5 4.13e-20   NR GMT18625.1 1538716 g3355 i0 40.9 0.87032967032967 132 71 86.4 3 2 394 1 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 396 90.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
28044058 28044058 PRJEB36940_P_NODE_6465_length_339_cov_1.165414_g6336_i0 PRJEB36940 6465 339 1.165414 3.95075346 Mesorhabditis belari 2138241 Nematoda Nematoda 156 1.06e-45   NR CAJ0931976.1 2138241 g6336 i0 69.1 2.92035398230089 110 32 97.3 1 336 7 14 121 CAJ0931976.1 unnamed protein product, partial [Mesorhabditis belari] diamond 990 156 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
28069047 28069047 PRJEB36940_P_NODE_4985_length_382_cov_1.715210_g4856_i0 PRJEB36940 4985 382 1.71521 6.5521022 Metazoa 33208 Nematoda Nematoda 45.8 0.00542   NR CAJ0576379.1 96644 g4856 i0 40.6 1.52356020942408 69 38 51.8 2 164 361 56 124 CAJ0576379.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 582 45.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
28100510 28100510 PRJEB36940_P_NODE_12045_length_254_cov_1.707182_g11916_i0 PRJEB36940 12045 254 1.707182 4.33624228 Opisthokonta 33154 Nematoda Nematoda 67.4 1.31e-11   NR CAI5449251.1 860376 g11916 i0 51.4 3.77952755905512 70 33 81.5 1 212 6 4 73 CAI5449251.1 unnamed protein product [Caenorhabditis angaria] diamond 960 67.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
28107095 28107095 PRJEB36940_P_NODE_10645_length_269_cov_2.158163_g10516_i0 PRJEB36940 10645 269 2.158163 5.80545847 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 43.5 0.0273   NR KAE9552225.1 2598192 g10516 i0 28.8 0.814126394052045 73 47 81.4 1 219 1 316 383 KAE9552225.1 hypothetical protein FO519_004569 [Halicephalobus sp. NKZ332] diamond 219 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
28163875 28163875 PRJEB36940_P_NODE_6525_length_337_cov_1.685606_g6396_i0 PRJEB36940 6525 337 1.685606 5.68049222 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 61.6 2.08e-8   NR KRZ32047.1 6337 g6396 i0 58.3 12.6142433234421 48 19 41.8 1 12 152 1 48 KRZ32047.1 Ras-related protein Rab-35 [Trichinella pseudospiralis] diamond 4251 61.6 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
28170385 28170385 PRJEB36940_P_NODE_9126_length_288_cov_1.181395_g8997_i0 PRJEB36940 9126 288 1.181395 3.4024176 Caenorhabditis remanei 31234 Nematoda Nematoda 107 8.63e-25   NR EFP01601.1 31234 g8997 i0 77.4 7.75 62 14 64.6 0 2 187 699 760 EFP01601.1 hypothetical protein CRE_03500 [Caenorhabditis remanei] diamond 2232 107 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
28321626 28321626 PRJEB36940_P_NODE_8806_length_292_cov_1.420091_g8677_i0 PRJEB36940 8806 292 1.420091 4.14666572 Metazoa 33208 Nematoda Nematoda 103 2.3e-23   NR VBB34587.1 6277 g8677 i0 58.7 58.9315068493151 92 37 93.5 1 290 18 157 248 VBB34587.1 unnamed protein product, partial [Acanthocheilonema viteae] diamond 17208 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
28486112 28486112 PRJEB36940_P_NODE_2027_length_593_cov_1.323077_g1904_i0 PRJEB36940 2027 593 1.323077 7.84584661 Pristionchus fissidentatus 1538716 Nematoda Nematoda 92 5.07e-18   NR GMT17543.1 1538716 g1904 i0 32.7 2.04890387858347 205 113 98.1 6 11 592 154 344 GMT17543.1 hypothetical protein PFISCL1PPCAC_8840, partial [Pristionchus fissidentatus] diamond 1215 92 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
28517760 28517760 PRJEB36940_P_NODE_8207_length_302_cov_2.104803_g8078_i0 PRJEB36940 8207 302 2.104803 6.35650506 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 43.9 0.028   NR CAD5231499.1 6326 g8078 i0 54.8 0.30794701986755 31 14 30.8 0 189 97 27 57 CAD5231499.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 93 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
28770215 28770215 PRJEB36940_P_NODE_6827_length_330_cov_1.509728_g6698_i0 PRJEB36940 6827 330 1.509728 4.9821024 Caenorhabditis angaria 860376 Nematoda Nematoda 51.2 1.05e-4   NR CAI5444626.1 860376 g6698 i0 43.6 1.24545454545455 55 27 49.1 2 145 306 355 406 CAI5444626.1 unnamed protein product [Caenorhabditis angaria] diamond 411 51.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
28928126 28928126 PRJEB36940_P_NODE_7548_length_315_cov_0.958678_g7419_i0 PRJEB36940 7548 315 0.958678 3.0198357 Diploscapter pachys 2018661 Nematoda Nematoda 142 8.21e-39   NR PAV75969.1 2018661 g7419 i0 61 6 105 41 100 0 1 315 37 141 PAV75969.1 hypothetical protein WR25_01581 isoform C [Diploscapter pachys] diamond 1890 142 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
29174331 29174331 PRJEB36940_P_NODE_9449_length_283_cov_5.585714_g9320_i0 PRJEB36940 9449 283 5.585714 15.80757062 Metazoa 33208 Nematoda Nematoda 155 1.5899999999999999e-46   NR ULT99372.1 6238 g9320 i0 83.9 159.943462897527 87 14 92.2 0 22 282 40 126 ULT99372.1 hypothetical protein L3Y34_000603 [Caenorhabditis briggsae] diamond 45264 155 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
29332048 29332048 PRJEB36940_P_NODE_10249_length_274_cov_1.303483_g10120_i0 PRJEB36940 10249 274 1.303483 3.57154342 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.9 6.75e-12   NR KAK5986744.1 6319 g10120 i0 49.3 5.63868613138686 73 36 79.9 1 41 259 167 238 KAK5986744.1 Phospholipase B, partial [Trichostrongylus colubriformis] diamond 1545 70.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Trichostrongylus Trichostrongylus colubriformis
29370232 29370232 PRJEB36940_P_NODE_14589_length_246_cov_0.890173_g14460_i0 PRJEB36940 14589 246 0.890173 2.18982558 Gnathostoma spinigerum 75299 Nematoda Nematoda 64.7 5.29e-10   NR MFH4973588.1 75299 g14460 i0 36.2 1.68292682926829 69 44 84.1 0 209 3 15 83 MFH4973588.1 hypothetical protein [Gnathostoma spinigerum] diamond 414 64.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gnathostomatidae Gnathostoma Gnathostoma spinigerum
29837124 29837124 PRJEB36940_P_NODE_8231_length_302_cov_1.275109_g8102_i0 PRJEB36940 8231 302 1.275109 3.85082918 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 117 1.02e-28   NR KAF8385599.1 54126 g8102 i0 56.6 12.8145695364238 99 43 98.3 0 300 4 83 181 KAF8385599.1 hypothetical protein PRIPAC_74741 [Pristionchus pacificus] diamond 3870 118 0.991525423728814 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
29900542 29900542 PRJEB36940_P_NODE_4331_length_411_cov_0.917160_g4202_i0 PRJEB36940 4331 411 0.91716 3.7695276 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 201 2.09e-63   NR KHN87687.1 6265 g4202 i0 68.2 25.4744525547445 129 41 94.2 0 391 5 1 129 KHN87687.1 ADP-ribosylation factor-like protein 2 [Toxocara canis] diamond 10470 201 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
30064796 30064796 PRJEB36940_P_NODE_1252_length_744_cov_3.676602_g1134_i0 PRJEB36940 1252 744 3.676602 27.35391888 Necator americanus 51031 Nematoda Nematoda 194 1.22e-56   NR XP_064059976.1 51031 g1134 i0 48.6 10.6693548387097 214 97 85.5 5 641 6 45 247 XP_064059976.1 hypothetical protein RB195_014013 [Necator americanus] diamond 7938 194 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
30374755 30374755 PRJEB36940_P_NODE_10472_length_271_cov_2.570707_g10343_i0 PRJEB36940 10472 271 2.570707 6.96661597 Opisthokonta 33154 Nematoda Nematoda 68.6 1.23e-12   NR VDK36830.1 6269 g10343 i0 45.1 7.56088560885609 71 39 78.6 0 255 43 2 72 VDK36830.1 unnamed protein product, partial [Anisakis simplex] diamond 2049 68.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
30696713 30696713 PRJEB36940_P_NODE_13134_length_250_cov_0.875706_g13005_i0 PRJEB36940 13134 250 0.875706 2.189265 Dracunculus medinensis 318479 Nematoda Nematoda 99.8 3.69e-22   NR VDN56256.1 318479 g13005 i0 62.2 0.984 82 28 94.8 1 249 13 509 590 VDN56256.1 unnamed protein product [Dracunculus medinensis] diamond 246 99.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
31233784 31233784 PRJEB36940_P_NODE_1355_length_714_cov_4.204368_g1236_i0 PRJEB36940 1355 714 4.204368 30.01918752 Meloidogyne graminicola 189291 Nematoda Nematoda 110 6.52e-25   NR AVZ46778.1 189291 g1236 i0 50 0.546218487394958 130 65 54.6 0 280 669 117 246 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 390 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
31961437 31961437 PRJEB36940_P_NODE_14018_length_247_cov_1.252874_g13889_i0 PRJEB36940 14018 247 1.252874 3.09459878 Mesorhabditis belari 2138241 Nematoda Nematoda 46.2 0.00236   NR CAJ0935150.1 2138241 g13889 i0 31.7 2.98785425101215 82 56 99.6 0 246 1 336 417 CAJ0935150.1 unnamed protein product, partial [Mesorhabditis belari] diamond 738 46.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
32081428 32081428 PRJEB36940_P_NODE_3438_length_458_cov_1.753247_g3310_i0 PRJEB36940 3438 458 1.753247 8.02987126 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 192 1.37e-57   NR CDJ80532.1 6289 g3310 i0 74.8 20.6659388646288 127 32 83.2 0 381 1 28 154 CDJ80532.1 Transketolase domain containing protein [Haemonchus contortus] diamond 9465 193 0.994818652849741 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
32081430 32081430 PRJEB36940_P_NODE_9498_length_283_cov_1.414286_g9369_i0 PRJEB36940 9498 283 1.414286 4.00242938 Rhabditida 6236 Nematoda Nematoda 117 5.95e-30   NR VDK52909.1 6269 g9369 i0 73.3 5.65017667844523 75 20 79.5 0 37 261 1 75 VDK52909.1 unnamed protein product [Anisakis simplex] diamond 1599 117 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
32278114 32278114 PRJEB36940_P_NODE_13719_length_248_cov_0.891429_g13590_i0 PRJEB36940 13719 248 0.891429 2.21074392 Diploscapter pachys 2018661 Nematoda Nematoda 66.6 1.44e-10   NR PAV55927.1 2018661 g13590 i0 48.6 2.32258064516129 74 34 88.3 3 30 248 164 234 PAV55927.1 hypothetical protein WR25_02766 [Diploscapter pachys] diamond 576 66.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;