RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB36940" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB36940 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12810232 12810232 PRJEB36940_P_NODE_11631_length_258_cov_16.075676_g11502_i0 PRJEB36940 11631 258 16.075676 41.47524408 Rozella allomycis CSF55 988480 Fungi Fungi 82.8 6.24e-17   NR EPZ34692.1 988480 g11502 i0 66.2 3.65116279069767 65 21 74.4 1 23 214 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32404563 32404563 PRJEB36940_P_NODE_8619_length_295_cov_1.045045_g8490_i0 PRJEB36940 8619 295 1.045045 3.08288275 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 96.7 8.1899999999999992e-21   NR PJF17090.1 1246581 g8490 i0 48.4 1.82033898305085 91 45 92.5 1 277 5 51 139 PJF17090.1 DNA-directed RNA polymerase subunit beta [Paramicrosporidium saccamoebae] diamond 537 96.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;