RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB36940" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB36940 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28738707 28738707 PRJEB36940_P_NODE_15367_length_243_cov_1.635294_g15238_i0 PRJEB36940 15367 243 1.635294 3.97376442 Armatimonadota bacterium 2033014 Bacteria Bacteria 59.7 1.7e-8   NR MDQ2687214.1 2033014 g15238 i0 71.4 0.518518518518518 42 11 51.9 1 129 4 1 41 MDQ2687214.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB [Armatimonadota bacterium] diamond 126 59.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30760112 30760112 PRJEB36940_P_NODE_5654_length_360_cov_3.160279_g5525_i0 PRJEB36940 5654 360 3.160279 11.3770044 Armatimonadota bacterium 2033014 Bacteria Bacteria 164 9.8e-46   NR MBS1726118.1 2033014 g5525 i0 68.7 3.875 115 33 95.8 1 355 11 316 427 MBS1726118.1 MmgE/PrpD family protein [Armatimonadota bacterium] diamond 1395 164 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32183105 32183105 PRJEB36940_P_NODE_3058_length_486_cov_0.830508_g2931_i0 PRJEB36940 3058 486 0.830508 4.03626888 Armatimonadota bacterium 2033014 Bacteria Bacteria 61.2 1.71e-7   NR MBS1718041.1 2033014 g2931 i0 41.9 0.530864197530864 86 40 52.5 2 34 288 14 90 MBS1718041.1 hypothetical protein [Armatimonadota bacterium] diamond 258 61.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;