RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJEB36940", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJEB36940 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27121265 27121265 PRJEB36940_P_NODE_1182_length_764_cov_1.348770_g1065_i0 PRJEB36940 1182 764 1.34877 10.3046028 Valvatida 41166 Echinodermata other_Eukaryota 208 1.45e-61   NR XP_038074570.1 46514 g1065 i0 43.9 2.77225130890052 237 103 91.5 5 725 27 71 281 XP_038074570.1 uncharacterized protein LOC119742563 [Patiria miniata] diamond 2118 208 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
27121268 27121268 PRJEB36940_P_NODE_4222_length_416_cov_1.804665_g4093_i0 PRJEB36940 4222 416 1.804665 7.5074064 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.4 4.21e-4   NR XP_071507857.1 105358 g4093 i0 34.8 1.78125 92 55 64.9 2 278 9 44 132 XP_071507857.1 heterogeneous nuclear ribonucleoprotein A3-like isoform X2 [Diadema antillarum] diamond 741 50.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
27602208 27602208 PRJEB36940_P_NODE_6084_length_348_cov_2.196364_g5955_i0 PRJEB36940 6084 348 2.196364 7.64334672 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 52 3.95e-5   NR PIK43823.1 307972 g5955 i0 39.2 1.53448275862069 97 54 83.6 4 291 1 1 92 PIK43823.1 putative proteinase K [Apostichopus japonicus] diamond 534 52 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
28012681 28012681 PRJEB36940_P_NODE_8465_length_298_cov_1.008889_g8336_i0 PRJEB36940 8465 298 1.008889 3.00648922 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 43.1 0.0389   NR XP_783897.2 7668 g8336 i0 32.9 0.855704697986577 85 52 84.6 2 273 22 3 83 XP_783897.2 phosphatidylcholine transfer protein [Strongylocentrotus purpuratus] diamond 255 43.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
28195177 28195177 PRJEB36940_P_NODE_12346_length_252_cov_1.469274_g12217_i0 PRJEB36940 12346 252 1.469274 3.70257048 Metazoa 33208 Echinodermata other_Eukaryota 130 8.16e-33   NR XP_071504792.1 105358 g12217 i0 75.9 25.6666666666667 83 20 98.8 0 249 1 561 643 XP_071504792.1 major vault protein [Diadema antillarum] diamond 6468 130 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
28486124 28486124 PRJEB36940_P_NODE_7927_length_307_cov_2.235043_g7798_i0 PRJEB36940 7927 307 2.235043 6.86158201 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 60.1 6.41e-8   NR XP_041485513.1 7654 g7798 i0 44.4 3.35179153094463 72 21 66.4 3 229 26 3 59 XP_041485513.1 E3 ubiquitin/ISG15 ligase TRIM25-like [Lytechinus variegatus] diamond 1029 60.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
28637615 28637615 PRJEB36940_P_NODE_12747_length_251_cov_0.876404_g12618_i0 PRJEB36940 12747 251 0.876404 2.19977404 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.7 4.26e-8   NR XP_038070149.1 46514 g12618 i0 40 1.76892430278884 75 45 89.6 0 226 2 117 191 XP_038070149.1 xaa-Pro dipeptidase-like [Patiria miniata] diamond 444 59.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
30696722 30696722 PRJEB36940_P_NODE_6054_length_349_cov_1.974638_g5925_i0 PRJEB36940 6054 349 1.974638 6.89148662 Diadema antillarum 105358 Echinodermata other_Eukaryota 58.9 2.49e-7   NR XP_071481083.1 105358 g5925 i0 38.3 0.696275071633238 81 48 67.9 2 240 4 20 100 XP_071481083.1 carboxypeptidase B-like [Diadema antillarum] diamond 243 58.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
31455467 31455467 PRJEB36940_P_NODE_13916_length_248_cov_0.868571_g13787_i0 PRJEB36940 13916 248 0.868571 2.15405608 Diadema antillarum 105358 Echinodermata other_Eukaryota 55.1 2.51e-7   NR XP_071478751.1 105358 g13787 i0 35.2 0.858870967741935 71 46 85.9 0 242 30 37 107 XP_071478751.1 cystatin-A-like [Diadema antillarum] diamond 213 55.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;