RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB36940", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB36940 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6435002 6435002 PRJEB36940_P_NODE_3706_length_442_cov_1.414634_g3577_i0 PRJEB36940 3706 442 1.414634 6.25268228 Mitosporidium daphniae 1485682 Fungi Fungi 120 2.05e-28   NR XP_013238610.1 1485682 g3577 i0 68.6 4.60180995475113 86 24 56.3 1 249 1 57 142 XP_013238610.1 uncharacterized protein DI09_1p330 [Mitosporidium daphniae] diamond 2034 120 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
27500906 27500906 PRJEB36940_P_NODE_7483_length_316_cov_1.596708_g7354_i0 PRJEB36940 7483 316 1.596708 5.04559728 Nematocida 586132 Fungi Fungi 159 1.5e-42   NR OAG31464.1 1805481 g7354 i0 69.5 4.98417721518987 105 32 99.7 0 316 2 87 191 OAG31464.1 isoleucyl-tRNA synthetase [Nematocida sp. ERTm5] diamond 1575 160 0.99375 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida sp. ERTm5
29717204 29717204 PRJEB36940_P_NODE_15970_length_242_cov_0.917160_g15841_i0 PRJEB36940 15970 242 0.91716 2.2195272 Mitosporidium daphniae 1485682 Fungi Fungi 50.1 5.17e-5   NR XP_013237468.1 1485682 g15841 i0 42.6 3.11157024793388 61 34 74.4 1 180 1 47 107 XP_013237468.1 RNA recognition motif RNP 1 [Mitosporidium daphniae] diamond 753 50.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
32246622 32246622 PRJEB36940_P_NODE_6698_length_333_cov_1.511538_g6569_i0 PRJEB36940 6698 333 1.511538 5.03342154 Edhazardia aedis USNM 41457 1003232 Fungi Fungi 44.3 0.0264   NR EJW01629.1 1003232 g6569 i0 57.9 0.342342342342342 38 15 34.2 1 115 2 2 38 EJW01629.1 hypothetical protein EDEG_03832 [Edhazardia aedis USNM 41457] diamond 114 44.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Culicosporidae Edhazardia Edhazardia aedis
32681830 32681830 PRJEB36940_P_NODE_8840_length_292_cov_1.063927_g8711_i0 PRJEB36940 8840 292 1.063927 3.10666684 Nosematidae 27974 Fungi Fungi 49.3 1.98e-4   NR KAF9764799.1 83296 g8711 i0 47.1 3.67808219178082 51 27 52.4 0 10 162 134 184 KAF9764799.1 Transforming protein RhoA [Nosema granulosis] diamond 1074 49.7 0.991951710261569 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;