RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB36940", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 3 ✖

bioproject 1

  • PRJEB36940 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28486106 28486106 PRJEB36940_P_NODE_10227_length_274_cov_1.552239_g10098_i0 PRJEB36940 10227 274 1.552239 4.25313486 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 67 1.4e-10   NR MCA9401843.1 2035772 g10098 i0 37.8 0.985401459854015 90 56 98.5 0 274 5 163 252 MCA9401843.1 SGNH/GDSL hydrolase family protein [Candidatus Omnitrophota bacterium] diamond 270 67 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32214713 32214713 PRJEB36940_P_NODE_8698_length_294_cov_1.040724_g8569_i0 PRJEB36940 8698 294 1.040724 3.05972856 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 97.1 5.8700000000000006e-21   NR MCA9403363.1 2035772 g8569 i0 43.8 1.88775510204082 96 53 96.9 1 8 292 238 333 MCA9403363.1 amino acid adenylation domain-containing protein [Candidatus Omnitrophota bacterium] diamond 555 97.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32398044 32398044 PRJEB36940_P_NODE_8379_length_299_cov_2.212389_g8250_i0 PRJEB36940 8379 299 2.212389 6.61504311 root 1 Root_unresolved Root_unresolved 86.3 2.64e-18   NR MFC1703452.1 2035772 g8250 i0 56.5 5.39799331103679 69 30 69.2 0 208 2 1 69 MFC1703452.1 adenylate kinase [Candidatus Omnitrophota bacterium] diamond 1614 86.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;