RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB36940", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJEB36940 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27917659 27917659 PRJEB36940_P_NODE_5585_length_362_cov_17.543253_g5456_i0 PRJEB36940 5585 362 17.543253 63.50657586 Streblomastix strix 222440 Preaxostyla other_Eukaryota 111 2.61e-29   NR KAA6379614.1 222440 g5456 i0 58.2 2.24585635359116 91 38 75.4 0 358 86 3 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 813 111 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
29900543 29900543 PRJEB36940_P_NODE_7771_length_310_cov_1.687764_g7642_i0 PRJEB36940 7771 310 1.687764 5.2320684 Oxymonadida 66288 Preaxostyla other_Eukaryota 58.2 2.72e-7   NR KAA6401344.1 222440 g7642 i0 30.1 1.61612903225806 83 58 80.3 0 56 304 22 104 KAA6401344.1 MAG: putative cell cycle control protein [Streblomastix strix] diamond 501 58.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
30760117 30760117 PRJEB36940_P_NODE_9234_length_286_cov_2.150235_g9105_i0 PRJEB36940 9234 286 2.150235 6.1496721 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 91.3 5.57e-19   NR KAK2964795.1 2049346 g9105 i0 48.9 0.923076923076923 88 41 88.1 2 253 2 300 387 KAK2964795.1 putative CCR4-NOT transcription complex subunit 8 [Blattamonas nauphoetae] diamond 264 91.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
30816650 30816650 PRJEB36940_P_NODE_12014_length_254_cov_3.723757_g11885_i0 PRJEB36940 12014 254 3.723757 9.45834278 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 103 2.5599999999999994e-24   NR KAJ4455538.1 342808 g11885 i0 90.9 1.96062992125984 55 5 65 0 167 3 7 61 KAJ4455538.1 putative Serine/threonine-protein phosphatase PP-X isozyme 2 [Paratrimastix pyriformis] diamond 498 103 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;