contig_metadata
6 rows where bioproject = "PRJEB36940", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9917171 | 9917171 | PRJEB36940_P_NODE_15068_length_244_cov_0.912281_g14939_i0 | PRJEB36940 | 15068 | 244 | 0.912281 | 2.22596564 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 162 | 1.14e-47 | NR | HEX7978956.1 | 2026741 | g14939 | i0 | 97.5 | 0.995901639344262 | 81 | 2 | 99.6 | 0 | 1 | 243 | 51 | 131 | HEX7978956.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Gemmatimonadaceae bacterium] | diamond | 243 | 162 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 10259587 | 10259587 | PRJEB36940_P_NODE_5609_length_362_cov_1.079585_g5480_i0 | PRJEB36940 | 5609 | 362 | 1.079585 | 3.9080977 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 448 | 3.7499999999999997e-121 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g5480 | i0 | 89.011 | 57.767955801105 | 364 | 37 | 100 | 3 | 1 | 362 | 1103284 | 1102922 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 20912 | 448 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 23941330 | 23941330 | PRJEB36940_P_NODE_12299_length_252_cov_2.569832_g12170_i0 | PRJEB36940 | 12299 | 252 | 2.569832 | 6.47597664 | Gemmatimonas | 173479 | Bacteria | Bacteria | 427 | 3.2499999999999993e-115 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g12170 | i0 | 97.222 | 20.9603174603175 | 252 | 7 | 100 | 0 | 1 | 252 | 853 | 1104 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 5282 | 427 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 27665365 | 27665365 | PRJEB36940_P_NODE_7104_length_324_cov_1.406375_g6975_i0 | PRJEB36940 | 7104 | 324 | 1.406375 | 4.556655 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 44.3 | 0.0259 | NR | HEV2018235.1 | 2026741 | g6975 | i0 | 40.4 | 0.527777777777778 | 57 | 29 | 48.1 | 1 | 273 | 118 | 8 | 64 | HEV2018235.1 PQQ-dependent sugar dehydrogenase [Gemmatimonadaceae bacterium] | diamond | 171 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29559474 | 29559474 | PRJEB36940_P_NODE_1090_length_801_cov_7.211538_g975_i0 | PRJEB36940 | 1090 | 801 | 7.211538 | 57.76441938 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 121 | 1.84e-29 | NR | HEX2080112.1 | 2029185 | g975 | i0 | 36.8 | 3.98876404494382 | 220 | 121 | 80.5 | 8 | 712 | 68 | 2 | 208 | HEX2080112.1 hypothetical protein [Longimicrobium sp.] | diamond | 3195 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 32499639 | 32499639 | PRJEB36940_P_NODE_14439_length_246_cov_0.901734_g14310_i0 | PRJEB36940 | 14439 | 246 | 0.901734 | 2.21826564 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 119 | 6.86e-33 | NR | HEX6695017.1 | 2910168 | g14310 | i0 | 82.1 | 0.817073170731707 | 67 | 12 | 81.7 | 0 | 2 | 202 | 49 | 115 | HEX6695017.1 hypothetical protein [Longimicrobiales bacterium] | diamond | 201 | 119 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;