contig_metadata
9 rows where bioproject = "PRJEB3181" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1330209 | 1330209 | PRJEB3181_P_NODE_1022_length_586_cov_61.590991_g888_i0 | PRJEB3181 | 1022 | 586 | 61.590991 | 360.92320726 | Desulfolithobacter dissulfuricans | 2795293 | Bacteria | Bacteria | 115 | 7.28e-21 | NTclustered | gi|2304357171|dbj|AP024233.1| | 2795293 | g888 | i0 | 72.245 | 4.17235494880546 | 490 | 97 | 81 | 32 | 35 | 507 | 1926039 | 1925572 | Desulfobulbaceae bacterium GF1 GF1 DNA, complete genome | blastn | 2445 | 115 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfolithobacter | Desulfolithobacter dissulfuricans | ||
| 2264127 | 2264127 | PRJEB3181_P_NODE_4682_length_369_cov_36.384615_g4434_i0 | PRJEB3181 | 4682 | 369 | 36.384615 | 134.25922935 | Geobacter | 28231 | Bacteria | Bacteria | 217 | 1.17e-51 | NTclustered | gi|470477521|ref|NR_076389.1| | 28232 | g4434 | i0 | 84.12 | 97.1680216802168 | 233 | 27 | 62 | 8 | 42 | 271 | 226 | 1 | Geobacter metallireducens strain GS-15 23S ribosomal RNA gene, complete sequence | blastn | 35855 | 219 | 0.990867579908676 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter metallireducens | ||
| 6434290 | 6434290 | PRJEB3181_S_NODE_1926_length_374_cov_18959.799410_g1634_i0 | PRJEB3181 | 1926 | 374 | 18959.79941 | 70909.6497934 | Desulfocarbo indianensis | 1348163 | Bacteria | Bacteria | 83.6 | 3.59e-17 | NR | KMY68640.1 | 1348163 | g1634 | i0 | 42.2 | 0.818181818181818 | 102 | 58 | 81 | 1 | 4 | 306 | 58 | 159 | KMY68640.1 hypothetical protein AAU61_03170 [Desulfocarbo indianensis] | diamond | 306 | 83.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfocarbo | Desulfocarbo indianensis | ||
| 8983157 | 8983157 | PRJEB3181_S_NODE_14508_length_170_cov_2.014815_g14215_i0 | PRJEB3181 | 14508 | 170 | 2.014815 | 3.4251855 | Desulfobulbus oralis | 1986146 | Bacteria | Bacteria | 63.9 | 6.57e-6 | NTclustered | gi|1343450889|gb|CP021255.1| | 1986146 | g14215 | i0 | 95 | 7.58235294117647 | 40 | 2 | 24 | 0 | 1 | 40 | 1765204 | 1765243 | Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome | blastn | 1289 | 63.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus oralis | ||
| 19181607 | 19181607 | PRJEB3181_S_NODE_6236_length_247_cov_9.575472_g5943_i0 | PRJEB3181 | 6236 | 247 | 9.575472 | 23.65141584 | Desulfolithobacter dissulfuricans | 2795293 | Bacteria | Bacteria | 86.1 | 2.2e-12 | NTclustered | gi|2304357171|dbj|AP024233.1| | 2795293 | g5943 | i0 | 74.468 | 2.27125506072874 | 235 | 42 | 92 | 17 | 5 | 231 | 1925572 | 1925796 | Desulfobulbaceae bacterium GF1 GF1 DNA, complete genome | blastn | 561 | 86.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfolithobacter | Desulfolithobacter dissulfuricans | ||
| 21732899 | 21732899 | PRJEB3181_S_NODE_7398_length_229_cov_33297.278351_g7105_i0 | PRJEB3181 | 7398 | 229 | 33297.278351 | 76250.76742379 | Syntrophotalea acetylenica | 29542 | Bacteria | Bacteria | 196 | 8.92e-46 | NTclustered | gi|1109565244|gb|CP015455.1| | 29542 | g7105 | i0 | 88.485 | 106.947598253275 | 165 | 16 | 72 | 3 | 66 | 229 | 788739 | 788577 | Syntrophotalea acetylenica strain DSM 3246 chromosome, complete genome | blastn | 24491 | 196 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Syntrophotaleaceae | Syntrophotalea | Syntrophotalea acetylenica | ||
| 28201701 | 28201701 | PRJEB3181_P_NODE_10126_length_267_cov_3.364407_g9862_i0 | PRJEB3181 | 10126 | 267 | 3.364407 | 8.98296669 | Desulfocarbo indianensis | 1348163 | Bacteria | Bacteria | 79.3 | 4.27e-16 | NR | KMY68640.1 | 1348163 | g9862 | i0 | 43.8 | 1 | 89 | 49 | 98.9 | 1 | 265 | 2 | 71 | 159 | KMY68640.1 hypothetical protein AAU61_03170 [Desulfocarbo indianensis] | diamond | 267 | 79.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfocarbo | Desulfocarbo indianensis | ||
| 29338657 | 29338657 | PRJEB3181_P_NODE_18669_length_191_cov_3.800000_g18405_i0 | PRJEB3181 | 18669 | 191 | 3.8 | 7.258 | Hydrosulfovibrio ferrireducens | 2934181 | Bacteria | Bacteria | 41.6 | 0.00864 | NR | MFQ6757171.1 | 2934181 | g18405 | i0 | 53.1 | 0.50261780104712 | 32 | 10 | 50.3 | 1 | 49 | 144 | 48 | 74 | MFQ6757171.1 hypothetical protein [Desulfovibrionaceae bacterium CB1MN] | diamond | 96 | 41.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Hydrosulfovibrio | Hydrosulfovibrio ferrireducens | ||
| 30286494 | 30286494 | PRJEB3181_S_NODE_18132_length_153_cov_1.016949_g17839_i0 | PRJEB3181 | 18132 | 153 | 1.016949 | 1.55593197 | Salidesulfovibrio onnuriiensis | 2583823 | Bacteria | Bacteria | 45.4 | 0.0012 | NR | WP_147822621.1 | 2583823 | g17839 | i0 | 58.6 | 0.568627450980392 | 29 | 11 | 56.9 | 1 | 148 | 62 | 413 | 440 | WP_147822621.1 thiamine pyridinylase [Salidesulfovibrio onnuriiensis] | diamond | 87 | 45.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Salidesulfovibrio | Salidesulfovibrio onnuriiensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;