contig_metadata
46 rows where bioproject = "PRJEB3181" and tax_phylum = "Oomycota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56175 | 56175 | PRJEB3181_S_NODE_5521_length_259_cov_2.142857_g5228_i0 | PRJEB3181 | 5521 | 259 | 2.142857 | 5.54999963 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 270 | 5.98e-68 | NTclustered | gi|166037280|emb|CU357145.1| | 100861 | g5228 | i0 | 85.714 | 10.1891891891892 | 266 | 27 | 100 | 8 | 1 | 259 | 882 | 621 | Aphanomyces euteiches cDNA | blastn | 2639 | 270 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 1330238 | 1330238 | PRJEB3181_P_NODE_18202_length_194_cov_2.533742_g17938_i0 | PRJEB3181 | 18202 | 194 | 2.533742 | 4.91545948 | Aphanomyces brasiliensis | 2525538 | SAR_Eukaryotes | SAR_Eukaryotes | 316 | 5.38e-82 | NTclustered | gi|2098511708|gb|OK235679.1| | 2525538 | g17938 | i0 | 98.333 | 94.3144329896907 | 180 | 3 | 93 | 0 | 1 | 180 | 120 | 299 | Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence | blastn | 18297 | 316 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces brasiliensis | ||
| 2264188 | 2264188 | PRJEB3181_S_NODE_5622_length_257_cov_11.004505_g5329_i0 | PRJEB3181 | 5622 | 257 | 11.004505 | 28.28157785 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 363 | 9.51e-96 | NTclustered | gi|2248512996|ref|NC_063794.1| | 4785 | g5329 | i0 | 98.086 | 84.9338521400778 | 209 | 3 | 81 | 1 | 1 | 209 | 1011 | 1218 | Phytophthora cinnamomi culture NZFS:3750 mitochondrion, complete genome | blastn | 21828 | 363 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 2605862 | 2605862 | PRJEB3181_P_NODE_10303_length_264_cov_8.618026_g10039_i0 | PRJEB3181 | 10303 | 264 | 8.618026 | 22.75158864 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 97.1 | 1.1e-15 | NTclustered | gi|813142527|ref|XM_012343931.1| | 695850 | g10039 | i0 | 87.805 | 1.14015151515152 | 82 | 10 | 31 | 0 | 66 | 147 | 1128 | 1209 | Saprolegnia parasitica CBS 223.65 60S ribosomal protein L3 mRNA | blastn | 301 | 97.1 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 3539394 | 3539394 | PRJEB3181_S_NODE_1223_length_434_cov_128.784461_g941_i0 | PRJEB3181 | 1223 | 434 | 128.784461 | 558.92456074 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 87.9 | 1.15e-12 | NTclustered | gi|307940088|gb|HM441765.1| | 179533 | g941 | i0 | 98 | 9.95161290322581 | 50 | 1 | 12 | 0 | 54 | 103 | 220 | 171 | Uncultured oomycete clone s8-Alf-20 large subunit ribosomal RNA gene, partial sequence | blastn | 4319 | 87.9 | 1 | Eukaryota | Sar | Oomycota | uncultured Oomycota | ||||||
| 5158389 | 5158389 | PRJEB3181_S_NODE_11865_length_187_cov_1.381579_g11572_i0 | PRJEB3181 | 11865 | 187 | 1.381579 | 2.58355273 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 303 | 4e-78 | NTclustered | gi|256009645|gb|GQ374534.1| | 112090 | g11572 | i0 | 96.216 | 86.1818181818182 | 185 | 7 | 99 | 0 | 1 | 185 | 372 | 188 | Aphanomyces astaci strain Gb04 28S ribosomal RNA gene, partial sequence | blastn | 16116 | 303 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 6434390 | 6434390 | PRJEB3181_S_NODE_946_length_475_cov_9.218182_g674_i0 | PRJEB3181 | 946 | 475 | 9.218182 | 43.7863645 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 636 | 1e-177 | NTclustered | gi|1111669722|ref|NC_032051.1| | 112090 | g674 | i0 | 98.343 | 81.5221052631579 | 362 | 6 | 76 | 0 | 1 | 362 | 2030 | 2391 | Aphanomyces astaci isolate AP03 mitochondrion, complete genome | blastn | 38723 | 636 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 7366452 | 7366452 | PRJEB3181_S_NODE_3086_length_321_cov_11.685315_g2793_i0 | PRJEB3181 | 3086 | 321 | 11.685315 | 37.50986115 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 510 | 4.13e-140 | NTclustered | gi|363498776|gb|JN662487.1| | 120398 | g2793 | i0 | 100 | 80.8909657320872 | 276 | 0 | 86 | 0 | 46 | 321 | 612 | 337 | Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 25966 | 510 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 10258806 | 10258806 | PRJEB3181_S_NODE_13769_length_174_cov_1.942446_g13476_i0 | PRJEB3181 | 13769 | 174 | 1.942446 | 3.37985604 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 104 | 3.98e-18 | NTclustered | gi|673034947|ref|XM_008873213.1| | 157072 | g13476 | i0 | 96.774 | 1.79310344827586 | 62 | 2 | 36 | 0 | 111 | 172 | 619 | 558 | Aphanomyces invadans hypothetical protein mRNA | blastn | 312 | 104 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 11534101 | 11534101 | PRJEB3181_P_NODE_12090_length_244_cov_2.737089_g11826_i0 | PRJEB3181 | 12090 | 244 | 2.737089 | 6.67849716 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 303 | 5.5e-78 | NTclustered | gi|813199067|ref|XR_001099866.1| | 695850 | g11826 | i0 | 89.627 | 70.8893442622951 | 241 | 21 | 98 | 4 | 4 | 242 | 1694 | 1456 | Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA | blastn | 17297 | 303 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 11534241 | 11534241 | PRJEB3181_S_NODE_1330_length_423_cov_23.597938_g1045_i0 | PRJEB3181 | 1330 | 423 | 23.597938 | 99.81927774 | Paralagenidium karlingii | 1440115 | SAR_Eukaryotes | SAR_Eukaryotes | 141 | 8.45e-29 | NTclustered | gi|2554484921|ref|NC_080886.1| | 1440115 | g1045 | i0 | 90.09 | 25.1583924349882 | 111 | 8 | 26 | 3 | 60 | 169 | 41656 | 41764 | Paralagenidium karlingii isolate 19-09020 mitochondrion, complete genome | blastn | 10642 | 141 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Paralagenidium | Paralagenidium karlingii | ||||
| 13742293 | 13742293 | PRJEB3181_P_NODE_1171_length_564_cov_46.791745_g1029_i0 | PRJEB3181 | 1171 | 564 | 46.791745 | 263.9054418 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 529 | 2.1099999999999992e-145 | NTclustered | gi|7658215|gb|AF119608.1| | 82940 | g1029 | i0 | 93.333 | 63.7358156028369 | 360 | 21 | 64 | 2 | 74 | 433 | 543 | 187 | Globisporangium middletonii culture CBS:528.74 strain CBS 528.74 large subunit ribosomal RNA gene, partial sequence | blastn | 35947 | 534 | 0.99063670411985 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium middletonii | ||
| 13742316 | 13742316 | PRJEB3181_P_NODE_8951_length_283_cov_160.285714_g8687_i0 | PRJEB3181 | 8951 | 283 | 160.285714 | 453.60857062 | Pythiaceae | 4782 | SAR_Eukaryotes | SAR_Eukaryotes | 499 | 7.76e-137 | NTclustered | gi|338798188|gb|HQ665249.1| | 82940 | g8687 | i0 | 99.634 | 96.3074204946996 | 273 | 1 | 96 | 0 | 11 | 283 | 296 | 24 | Pythium middletonii isolate CBS 528.74 28S large subunit ribosomal RNA gene, partial sequence | blastn | 27255 | 499 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium middletonii | ||
| 14084433 | 14084433 | PRJEB3181_S_NODE_512_length_605_cov_11326.921053_g285_i0 | PRJEB3181 | 512 | 605 | 11326.921053 | 68527.87237065 | Achlya hypogyna | 1202772 | SAR_Eukaryotes | SAR_Eukaryotes | 929 | 0 | NTclustered | gi|542687346|ref|NC_022178.1| | 1202772 | g285 | i0 | 97.278 | 98.9520661157025 | 551 | 10 | 90 | 3 | 56 | 602 | 6451 | 5902 | Achlya hypogyna mitochondrion, complete genome | blastn | 59866 | 929 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya hypogyna | ||
| 15358228 | 15358228 | PRJEB3181_S_NODE_2653_length_338_cov_15.419142_g2360_i0 | PRJEB3181 | 2653 | 338 | 15.419142 | 52.11669996 | Aphanomyces brasiliensis | 2525538 | SAR_Eukaryotes | SAR_Eukaryotes | 625 | 1.4999999999999999e-174 | NTclustered | gi|2098511708|gb|OK235679.1| | 2525538 | g2360 | i0 | 100 | 99.5887573964497 | 338 | 0 | 100 | 0 | 1 | 338 | 581 | 918 | Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence | blastn | 33661 | 625 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces brasiliensis | ||
| 16291502 | 16291502 | PRJEB3181_P_NODE_16753_length_203_cov_27.802326_g16489_i0 | PRJEB3181 | 16753 | 203 | 27.802326 | 56.43872178 | Saprolegniales | 4763 | SAR_Eukaryotes | SAR_Eukaryotes | 267 | 5.799999999999999e-67 | NTclustered | gi|50261276|ref|NC_005984.1| | 4770 | g16489 | i0 | 95.783 | 85.4187192118227 | 166 | 6 | 81 | 1 | 1 | 165 | 9353 | 9188 | Saprolegnia ferax mitochondrion, complete genome | blastn | 17340 | 268 | 0.996268656716418 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia ferax | ||
| 16632846 | 16632846 | PRJEB3181_P_NODE_24534_length_163_cov_1.257576_g24269_i0 | PRJEB3181 | 24534 | 163 | 1.257576 | 2.04984888 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 156 | 1.01e-33 | NTclustered | gi|166042617|emb|CU350856.1| | 100861 | g24269 | i0 | 89.431 | 3.42944785276074 | 123 | 13 | 75 | 0 | 41 | 163 | 703 | 581 | Aphanomyces euteiches cDNA | blastn | 559 | 156 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 16632888 | 16632888 | PRJEB3181_P_NODE_9254_length_279_cov_4.040323_g8990_i0 | PRJEB3181 | 9254 | 279 | 4.040323 | 11.27250117 | Globisporangium ultimum | 2052682 | SAR_Eukaryotes | SAR_Eukaryotes | 446 | 1.01e-120 | NTclustered | gi|299830435|ref|NC_014280.1| | 2052682 | g8990 | i0 | 95.683 | 101.68458781362 | 278 | 10 | 99 | 2 | 3 | 279 | 10078 | 10354 | Pythium ultimum mitochondrion, complete genome | blastn | 28370 | 446 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium ultimum | ||
| 16632969 | 16632969 | PRJEB3181_S_NODE_2234_length_357_cov_1363.888199_g1941_i0 | PRJEB3181 | 2234 | 357 | 1363.888199 | 4869.08087043 | Aphanomyces stellatus | 120398 | SAR_Eukaryotes | SAR_Eukaryotes | 523 | 5.959999999999998e-144 | NTclustered | gi|363498776|gb|JN662487.1| | 120398 | g1941 | i0 | 99.65 | 79.1344537815126 | 286 | 1 | 80 | 0 | 20 | 305 | 38 | 323 | Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 28251 | 523 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 17566654 | 17566654 | PRJEB3181_P_NODE_2014_length_485_cov_23.055066_g1831_i0 | PRJEB3181 | 2014 | 485 | 23.055066 | 111.8170701 | Saprolegniales | 4763 | SAR_Eukaryotes | SAR_Eukaryotes | 787 | 0 | NTclustered | gi|1111669722|ref|NC_032051.1| | 112090 | g1831 | i0 | 96.082 | 109.113402061856 | 485 | 16 | 99 | 3 | 3 | 485 | 1889 | 2372 | Aphanomyces astaci isolate AP03 mitochondrion, complete genome | blastn | 52920 | 789 | 0.997465145754119 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 17907766 | 17907766 | PRJEB3181_S_NODE_5735_length_255_cov_302.790909_g5442_i0 | PRJEB3181 | 5735 | 255 | 302.790909 | 772.11681795 | Globisporangium ultimum | 2052682 | SAR_Eukaryotes | SAR_Eukaryotes | 350 | 7.34e-92 | NTclustered | gi|299830435|ref|NC_014280.1| | 2052682 | g5442 | i0 | 96.682 | 84.0901960784314 | 211 | 5 | 82 | 2 | 1 | 210 | 9445 | 9236 | Pythium ultimum mitochondrion, complete genome | blastn | 21443 | 350 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium ultimum | ||
| 17907797 | 17907797 | PRJEB3181_S_NODE_8635_length_214_cov_1317.374302_g8342_i0 | PRJEB3181 | 8635 | 214 | 1317.374302 | 2819.18100628 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 95.3 | 3.09e-15 | NTclustered | gi|673035777|ref|XM_008873628.1| | 157072 | g8342 | i0 | 96.491 | 17.6542056074766 | 57 | 2 | 27 | 0 | 158 | 214 | 458 | 402 | Aphanomyces invadans hypothetical protein mRNA | blastn | 3778 | 95.3 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 18840532 | 18840532 | PRJEB3181_S_NODE_1415_length_414_cov_374.131926_g1127_i0 | PRJEB3181 | 1415 | 414 | 374.131926 | 1548.90617364 | Saprolegniales | 4763 | SAR_Eukaryotes | SAR_Eukaryotes | 102 | 1.82e-22 | NR | OQS07615.1 | 74557 | g1127 | i0 | 81 | 1.26086956521739 | 58 | 11 | 42 | 0 | 414 | 241 | 450 | 507 | OQS07615.1 thioredoxin reductase [Thraustotheca clavata] | diamond | 522 | 102 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 18840546 | 18840546 | PRJEB3181_S_NODE_2195_length_359_cov_1230.706790_g1902_i0 | PRJEB3181 | 2195 | 359 | 1230.70679 | 4418.2373761 | Pythiaceae | 4782 | SAR_Eukaryotes | SAR_Eukaryotes | 562 | 1.27e-155 | NTclustered | gi|338798188|gb|HQ665249.1| | 82940 | g1902 | i0 | 99.674 | 85.3231197771588 | 307 | 1 | 86 | 0 | 53 | 359 | 326 | 20 | Pythium middletonii isolate CBS 528.74 28S large subunit ribosomal RNA gene, partial sequence | blastn | 30631 | 562 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium middletonii | ||
| 22665670 | 22665670 | PRJEB3181_P_NODE_13958_length_226_cov_2.179487_g13694_i0 | PRJEB3181 | 13958 | 226 | 2.179487 | 4.92564062 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 368 | 1.76e-97 | NTclustered | gi|2248513480|ref|NC_063806.1| | 78236 | g13694 | i0 | 96.035 | 107.650442477876 | 227 | 7 | 99 | 1 | 1 | 225 | 2280 | 2054 | Phytophthora quercina isolate ST_201908082014 mitochondrion, complete genome | blastn | 24329 | 370 | 0.994594594594595 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora quercina | ||
| 23008053 | 23008053 | PRJEB3181_P_NODE_7819_length_301_cov_372.844444_g7557_i0 | PRJEB3181 | 7819 | 301 | 372.844444 | 1122.26177644 | Aphanomyces stellatus | 120398 | SAR_Eukaryotes | SAR_Eukaryotes | 488 | 1.7999999999999998e-133 | NTclustered | gi|363498776|gb|JN662487.1| | 120398 | g7557 | i0 | 98.901 | 88.5049833887043 | 273 | 3 | 91 | 0 | 29 | 301 | 299 | 27 | Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 26640 | 488 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 23008128 | 23008128 | PRJEB3181_S_NODE_16739_length_159_cov_0.967742_g16446_i0 | PRJEB3181 | 16739 | 159 | 0.967742 | 1.53870978 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 183 | 4.469999999999999e-42 | NTclustered | gi|698780676|ref|XM_009825080.1| | 112090 | g16446 | i0 | 92.857 | 17.8616352201258 | 126 | 9 | 79 | 0 | 34 | 159 | 780 | 655 | Aphanomyces astaci 60S ribosomal protein L8 mRNA | blastn | 2840 | 183 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 23941190 | 23941190 | PRJEB3181_P_NODE_3259_length_417_cov_24.847150_g3026_i0 | PRJEB3181 | 3259 | 417 | 24.84715 | 103.6126155 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 372 | 2.71e-98 | NTclustered | gi|363498776|gb|JN662487.1| | 120398 | g3026 | i0 | 91.575 | 65.2925659472422 | 273 | 18 | 65 | 4 | 14 | 285 | 502 | 234 | Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 27227 | 372 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 24281707 | 24281707 | PRJEB3181_P_NODE_13900_length_226_cov_6.789744_g13636_i0 | PRJEB3181 | 13900 | 226 | 6.789744 | 15.34482144 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 377 | 2.92e-100 | NTclustered | gi|698793876|ref|XR_717098.1| | 112090 | g13636 | i0 | 96.889 | 99.4070796460177 | 225 | 7 | 99 | 0 | 1 | 225 | 1863 | 2087 | Aphanomyces astaci 28S ribosomal RNA rRNA | blastn | 22466 | 377 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 24281896 | 24281896 | PRJEB3181_S_NODE_2300_length_354_cov_6.442006_g2007_i0 | PRJEB3181 | 2300 | 354 | 6.442006 | 22.80470124 | Pythiaceae | 4782 | SAR_Eukaryotes | SAR_Eukaryotes | 90.9 | 1.64e-20 | NR | TMW64892.1 | 41045 | g2007 | i0 | 80 | 3.72881355932203 | 55 | 11 | 46.6 | 0 | 2 | 166 | 94 | 148 | TMW64892.1 hypothetical protein Poli38472_009059 [Pythium oligandrum] | diamond | 1320 | 90.9 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium oligandrum | ||
| 24281973 | 24281973 | PRJEB3181_S_NODE_7860_length_224_cov_3.645503_g7567_i0 | PRJEB3181 | 7860 | 224 | 3.645503 | 8.16592672 | Pythium sp. AP | 378252 | SAR_Eukaryotes | SAR_Eukaryotes | 291 | 3.87e-74 | NTclustered | gi|90855438|dbj|AB254193.1| | 378252 | g7567 | i0 | 93.401 | 36.3883928571429 | 197 | 11 | 88 | 2 | 9 | 204 | 83 | 278 | Pythium sp. AP genes for 28S rRNA, IGS, 5S rRNA, partial and complete sequence, strain: AP-1, AP-2 and AP-3 | blastn | 8151 | 291 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium sp. AP | ||
| 27254435 | 27254435 | PRJEB3181_S_NODE_11303_length_191_cov_2.153846_g11010_i0 | PRJEB3181 | 11303 | 191 | 2.153846 | 4.11384586 | [Pythium] brassicae (nom. inval.) | 1485010 | SAR_Eukaryotes | SAR_Eukaryotes | 45.8 | 0.00154 | NR | TYZ57660.1 | 1485010 | g11010 | i0 | 64.5 | 0.973821989528796 | 31 | 11 | 48.7 | 0 | 1 | 93 | 743 | 773 | TYZ57660.1 hypothetical protein PybrP1_012513 [[Pythium] brassicae (nom. inval.)] | diamond | 186 | 45.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | [Pythium] brassicae (nom. inval.) | ||
| 27343071 | 27343071 | PRJEB3181_P_NODE_19923_length_184_cov_3.202614_g19659_i0 | PRJEB3181 | 19923 | 184 | 3.202614 | 5.89280976 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 51.2 | 3.29e-6 | NR | KAF0682728.1 | 120398 | g19659 | i0 | 76.9 | 4.23913043478261 | 26 | 6 | 42.4 | 0 | 180 | 103 | 92 | 117 | KAF0682728.1 hypothetical protein As57867_025101 [Aphanomyces stellatus] | diamond | 780 | 51.2 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 27847904 | 27847904 | PRJEB3181_S_NODE_10024_length_201_cov_0.993976_g9731_i0 | PRJEB3181 | 10024 | 201 | 0.993976 | 1.99789176 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 62 | 1.48e-10 | NR | KAF0729344.1 | 100861 | g9731 | i0 | 64.9 | 1.1044776119403 | 37 | 13 | 55.2 | 0 | 6 | 116 | 59 | 95 | KAF0729344.1 hypothetical protein Ae201684_013089 [Aphanomyces euteiches] | diamond | 222 | 62.4 | 0.993589743589744 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 28454697 | 28454697 | PRJEB3181_S_NODE_15486_length_165_cov_1.530769_g15193_i0 | PRJEB3181 | 15486 | 165 | 1.530769 | 2.52576885 | Aphanomyces cochlioides | 112091 | SAR_Eukaryotes | SAR_Eukaryotes | 41.2 | 0.0324 | NR | KAG9399323.1 | 112091 | g15193 | i0 | 63.9 | 0.654545454545455 | 36 | 11 | 61.8 | 1 | 3 | 104 | 135 | 170 | KAG9399323.1 hypothetical protein AC1031_011670 [Aphanomyces cochlioides] | diamond | 108 | 41.2 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 28517735 | 28517735 | PRJEB3181_P_NODE_27307_length_153_cov_1.803279_g27042_i0 | PRJEB3181 | 27307 | 153 | 1.803279 | 2.75901687 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 51.2 | 1.99e-6 | NR | XP_008874596.1 | 157072 | g27042 | i0 | 73.3 | 0.588235294117647 | 30 | 8 | 58.8 | 0 | 152 | 63 | 88 | 117 | XP_008874596.1 hypothetical protein H310_10110 [Aphanomyces invadans] | diamond | 90 | 51.2 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 29180903 | 29180903 | PRJEB3181_S_NODE_12369_length_183_cov_2.554054_g12076_i0 | PRJEB3181 | 12369 | 183 | 2.554054 | 4.67391882 | Aphanomyces cochlioides | 112091 | SAR_Eukaryotes | SAR_Eukaryotes | 102 | 1.31e-24 | NR | KAG9410527.1 | 112091 | g12076 | i0 | 96.3 | 1.77049180327869 | 54 | 2 | 88.5 | 0 | 3 | 164 | 237 | 290 | KAG9410527.1 hypothetical protein AC1031_018567 [Aphanomyces cochlioides] | diamond | 324 | 102 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 29963645 | 29963645 | PRJEB3181_P_NODE_14211_length_224_cov_1.518135_g13947_i0 | PRJEB3181 | 14211 | 224 | 1.518135 | 3.4006224 | root | 1 | Root_unresolved | Root_unresolved | 126 | 4.7e-35 | NR | RHY29645.1 | 157072 | g13947 | i0 | 70.3 | 51.8035714285714 | 74 | 22 | 99.1 | 0 | 223 | 2 | 92 | 165 | RHY29645.1 hypothetical protein DYB32_004989 [Aphanomyces invadans] | diamond | 11604 | 126 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 30633425 | 30633425 | PRJEB3181_P_NODE_2733_length_442_cov_2.119221_g2525_i0 | PRJEB3181 | 2733 | 442 | 2.119221 | 9.36695682 | Aphanomyces cochlioides | 112091 | SAR_Eukaryotes | SAR_Eukaryotes | 136 | 3.23e-36 | NR | KAG9410527.1 | 112091 | g2525 | i0 | 94.2 | 0.468325791855204 | 69 | 4 | 46.8 | 0 | 440 | 234 | 222 | 290 | KAG9410527.1 hypothetical protein AC1031_018567 [Aphanomyces cochlioides] | diamond | 207 | 136 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 30753487 | 30753487 | PRJEB3181_P_NODE_4434_length_376_cov_9.046377_g4186_i0 | PRJEB3181 | 4434 | 376 | 9.046377 | 34.01437752 | Viridiplantae | 33090 | SAR_Eukaryotes | SAR_Eukaryotes | 122 | 4.79e-31 | NR | KAG9404282.1 | 112091 | g4186 | i0 | 70.2 | 5.36968085106383 | 84 | 25 | 67 | 0 | 3 | 254 | 240 | 323 | KAG9404282.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [Aphanomyces cochlioides] | diamond | 2019 | 122 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 31044696 | 31044696 | PRJEB3181_P_NODE_15035_length_217_cov_2.682796_g14771_i0 | PRJEB3181 | 15035 | 217 | 2.682796 | 5.82166732 | Pythium oligandrum | 41045 | SAR_Eukaryotes | SAR_Eukaryotes | 93.6 | 1.66e-20 | NR | TMW60420.1 | 41045 | g14771 | i0 | 77.2 | 27.2350230414747 | 57 | 13 | 78.8 | 0 | 25 | 195 | 85 | 141 | TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] | diamond | 5910 | 93.6 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium oligandrum | ||
| 31385715 | 31385715 | PRJEB3181_P_NODE_7196_length_312_cov_4.633452_g6935_i0 | PRJEB3181 | 7196 | 312 | 4.633452 | 14.45637024 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 149 | 4.79e-43 | NR | XP_024574530.1 | 4781 | g6935 | i0 | 96.2 | 155.278846153846 | 78 | 3 | 75 | 0 | 17 | 250 | 36 | 113 | XP_024574530.1 ubiquitin-40s ribosomal protein s27a [Plasmopara halstedii] | diamond | 48447 | 149 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Plasmopara | Plasmopara halstedii | ||
| 31543822 | 31543822 | PRJEB3181_P_NODE_15676_length_212_cov_1.850829_g15412_i0 | PRJEB3181 | 15676 | 212 | 1.850829 | 3.92375748 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 54.3 | 2.04e-6 | NR | XP_024586721.1 | 4781 | g15412 | i0 | 80 | 6.04245283018868 | 25 | 5 | 35.4 | 0 | 1 | 75 | 471 | 495 | XP_024586721.1 glutathione reductase [Plasmopara halstedii] | diamond | 1281 | 54.3 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Plasmopara | Plasmopara halstedii | ||
| 32113232 | 32113232 | PRJEB3181_S_NODE_1618_length_398_cov_30.234160_g1328_i0 | PRJEB3181 | 1618 | 398 | 30.23416 | 120.3319568 | Viridiplantae | 33090 | SAR_Eukaryotes | SAR_Eukaryotes | 121 | 2.5199999999999997e-30 | NR | KAG9404282.1 | 112091 | g1328 | i0 | 70.7 | 3.71608040201005 | 82 | 24 | 61.8 | 0 | 3 | 248 | 242 | 323 | KAG9404282.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [Aphanomyces cochlioides] | diamond | 1479 | 121 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 32309841 | 32309841 | PRJEB3181_P_NODE_15199_length_216_cov_1.632432_g14935_i0 | PRJEB3181 | 15199 | 216 | 1.632432 | 3.52605312 | Nothophytophthora sp. Chile5 | 2483409 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 7.3e-6 | NR | RLN88511.1 | 2483409 | g14935 | i0 | 66.7 | 1.83333333333333 | 33 | 11 | 45.8 | 0 | 9 | 107 | 346 | 378 | RLN88511.1 hypothetical protein BBJ28_00024215 [Nothophytophthora sp. Chile5] | diamond | 396 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Nothophytophthora | Nothophytophthora sp. Chile5 | ||
| 32372979 | 32372979 | PRJEB3181_P_NODE_13159_length_233_cov_3.356436_g12895_i0 | PRJEB3181 | 13159 | 233 | 3.356436 | 7.82049588 | Albugo laibachii Nc14 | 890382 | SAR_Eukaryotes | SAR_Eukaryotes | 45.1 | 0.0037 | NR | CCA14227.1 | 890382 | g12895 | i0 | 54.7 | 0.682403433476395 | 53 | 22 | 65.7 | 1 | 229 | 77 | 153 | 205 | CCA14227.1 60S ribosomal protein L13 putative [Albugo laibachii Nc14] | diamond | 159 | 45.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;