RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB3181", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB3181 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24281871 24281871 PRJEB3181_S_NODE_16900_length_158_cov_1.626016_g16607_i0 PRJEB3181 16900 158 1.626016 2.56910528 Nitrosopumilus adriaticus 1580092 Archaea Archaea 62.1 2.17e-5   NTclustered gi|2790751567|gb|CP167059.1| 1580092 g16607 i0 97.222 0.227848101265823 36 1 23 0 55 90 882923 882958 Nitrosopumilus adriaticus strain CCS1 chromosome blastn 36 62.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus adriaticus
28707208 28707208 PRJEB3181_S_NODE_16727_length_159_cov_1.185484_g16434_i0 PRJEB3181 16727 159 1.185484 1.88491956 Nitrosarchaeum sp. 2026886 Archaea Archaea 93.6 1.43e-20   NR MFB5612793.1 2026886 g16434 i0 92.3 0.981132075471698 52 4 98.1 0 158 3 508 559 MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] diamond 156 93.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;