RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB3181", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB3181 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11192238 11192238 PRJEB3181_S_NODE_6409_length_244_cov_89.789474_g6116_i0 PRJEB3181 6409 244 89.789474 219.08631656 Viruses 10239 Viruses Viruses 63.9 1.02e-5   NTclustered gi|1832329193|gb|MT232426.1| 12730 g6116 i0 100 14.4385245901639 34 0 14 0 211 244 38 5 MAG: Human respirovirus 1 isolate 2019AZ, complete genome blastn 3523 63.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus laryngotracheitidis
23008155 23008155 PRJEB3181_S_NODE_3099_length_320_cov_467.161404_g2806_i0 PRJEB3181 3099 320 467.161404 1494.9164928 Orthoebolavirus sudanense 3052460 Viruses Viruses 63.9 1.39e-5   NTclustered gi|2471616984|gb|OQ673055.1| 186540 g2806 i0 97.297 10.790625 37 1 12 0 1 37 1 37 Sudan ebolavirus isolate Ebolavirus/H.sapiens-wt/Uganda/2022/2022002394_C054, partial genome blastn 3453 63.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Filoviridae Orthoebolavirus Orthoebolavirus sudanense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;