contig_metadata
8 rows where bioproject = "PRJEB3181" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7708466 | 7708466 | PRJEB3181_S_NODE_5267_length_263_cov_501.719298_g4974_i0 | PRJEB3181 | 5267 | 263 | 501.719298 | 1319.52175374 | uncultured Ureaplasma sp. | 293430 | Bacteria | Bacteria | 191 | 4.88e-44 | NTclustered | gi|1899225129|gb|MT967601.1| | 293430 | g4974 | i0 | 82.589 | 68.5855513307985 | 224 | 32 | 84 | 7 | 21 | 240 | 1965 | 1745 | Uncultured Ureaplasma sp. clone asv_100_2225 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 18038 | 191 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Ureaplasma | uncultured Ureaplasma sp. | |||
| 11534156 | 11534156 | PRJEB3181_P_NODE_25990_length_157_cov_5.246032_g25725_i0 | PRJEB3181 | 25990 | 157 | 5.246032 | 8.23627024 | Acholeplasma sp. G383 | 398172 | Bacteria | Bacteria | 58.4 | 2.78e-4 | NTclustered | gi|111283641|gb|DQ840503.1| | 398172 | g25725 | i0 | 89.13 | 4.54777070063694 | 46 | 5 | 29 | 0 | 110 | 155 | 327 | 282 | Acholeplasma sp. G383 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 714 | 58.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasma | Acholeplasma sp. G383 | ||
| 16632803 | 16632803 | PRJEB3181_P_NODE_15334_length_214_cov_16.153005_g15070_i0 | PRJEB3181 | 15334 | 214 | 16.153005 | 34.5674307 | uncultured Ureaplasma sp. | 293430 | Bacteria | Bacteria | 191 | 3.83e-44 | NTclustered | gi|1899225129|gb|MT967601.1| | 293430 | g15070 | i0 | 83.654 | 80.0981308411215 | 208 | 28 | 96 | 6 | 10 | 214 | 1948 | 1744 | Uncultured Ureaplasma sp. clone asv_100_2225 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 17141 | 191 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Ureaplasma | uncultured Ureaplasma sp. | |||
| 16632931 | 16632931 | PRJEB3181_S_NODE_14354_length_171_cov_1.161765_g14061_i0 | PRJEB3181 | 14354 | 171 | 1.161765 | 1.98661815 | Spiroplasma endosymbiont of Aspidapion aeneum | 3066276 | Bacteria | Bacteria | 58.4 | 3.08e-4 | NTclustered | gi|2719904881|emb|OZ034994.1| | 3066276 | g14061 | i0 | 81.333 | 0.964912280701754 | 75 | 10 | 42 | 4 | 15 | 86 | 944841 | 944768 | Spiroplasma endosymbiont of Aspidapion aeneum isolate 54746 genome assembly, chromosome: 1 | blastn | 165 | 58.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Aspidapion aeneum | ||
| 17566674 | 17566674 | PRJEB3181_S_NODE_13934_length_173_cov_3.434783_g13641_i0 | PRJEB3181 | 13934 | 173 | 3.434783 | 5.94217459 | Mycoplasmoidaceae | 2790998 | Bacteria | Bacteria | 187 | 3.82e-43 | NTclustered | gi|119369652|gb|EF061769.1| | 2097 | g13641 | i0 | 91.241 | 94.1387283236994 | 137 | 12 | 79 | 0 | 4 | 140 | 196 | 60 | Mycoplasma genitalium strain ATCC 33530 23S ribosomal RNA gene, partial sequence | blastn | 16286 | 187 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Mycoplasmoides | Mycoplasmoides genitalium | |||
| 19181541 | 19181541 | PRJEB3181_S_NODE_1756_length_386_cov_45.002849_g1465_i0 | PRJEB3181 | 1756 | 386 | 45.002849 | 173.71099714 | uncultured Mycoplasmatota bacterium | 658143 | Bacteria | Bacteria | 257 | 7.28e-64 | NTclustered | gi|2187163482|emb|OV788640.1| | 658143 | g1465 | i0 | 82.333 | 356.036269430052 | 300 | 50 | 77 | 3 | 2 | 300 | 373472 | 373769 | uncultured Tenericutes bacterium isolate min17_bin11 genome assembly, chromosome: 1 | blastn | 137430 | 257 | 1 | Bacteria | Bacillati | Mycoplasmatota | uncultured Mycoplasmatota bacterium | ||||||
| 23008179 | 23008179 | PRJEB3181_S_NODE_4779_length_274_cov_27065.142259_g4486_i0 | PRJEB3181 | 4779 | 274 | 27065.142259 | 74158.48978966 | Mycoplasmataceae bacterium | 2685873 | Bacteria | Bacteria | 375 | 1.3099999999999998e-99 | NTclustered | gi|2579242005|gb|CP125275.1| | 2685873 | g4486 | i0 | 97.285 | 24.4598540145985 | 221 | 6 | 81 | 0 | 54 | 274 | 543318 | 543538 | MAG: Mycoplasmataceae bacterium isolate AD185 chromosome, complete genome | blastn | 6702 | 375 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasmataceae bacterium | |||
| 31708386 | 31708386 | PRJEB3181_P_NODE_18197_length_194_cov_2.723926_g17933_i0 | PRJEB3181 | 18197 | 194 | 2.723926 | 5.28441644 | Mycoplasmoidaceae bacterium | 2854035 | Bacteria | Bacteria | 43.1 | 0.01 | NR | GMO17728.1 | 2854035 | g17933 | i0 | 50 | 0.649484536082474 | 42 | 21 | 64.9 | 0 | 4 | 129 | 135 | 176 | GMO17728.1 MAG: hypothetical protein Ta2E_08820 [Mycoplasmoidaceae bacterium] | diamond | 126 | 43.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Mycoplasmoidaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;