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contig_metadata

11 rows where bioproject = "PRJEB3181" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB3181 · 11 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8983203 8983203 PRJEB3181_S_NODE_2988_length_324_cov_71.432526_g2695_i0 PRJEB3181 2988 324 71.432526 231.44138424 Microsporidia sp. 1984797 Fungi Fungi 497 3.25e-136   NTclustered gi|1390157737|gb|MF374896.1| 1984797 g2695 i0 99.273 84.2253086419753 275 2 85 0 1 275 33 307 Microsporidia sp. isolate Q2-DKR-U 18S ribosomal RNA gene, partial sequence blastn 27289 497 1 Eukaryota Opisthokonta Fungi Microsporidia         Microsporidia sp.
8983289 8983289 PRJEB3181_S_NODE_9548_length_205_cov_30.005882_g9255_i0 PRJEB3181 9548 205 30.005882 61.5120581 Vittaforma corneae 42399 Fungi Fungi 233 5.96e-57   NTclustered gi|667639983|ref|XR_552275.1| 993615 g9255 i0 87.745 1.44878048780488 204 19 98 4 1 201 203 3 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 297 233 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
10258803 10258803 PRJEB3181_S_NODE_13569_length_175_cov_5.378571_g13276_i0 PRJEB3181 13569 175 5.378571 9.41249925 Microsporidium sp. BPAR15 PAR1 698187 Fungi Fungi 318 1.32e-82   NTclustered gi|272477435|gb|FJ756117.1| 698187 g13276 i0 99.429 100.302857142857 175 1 100 0 1 175 239 65 Microsporidium sp. BPAR15 PAR1 small subunit ribosomal RNA gene, partial sequence blastn 17553 318 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. BPAR15 PAR1
10258868 10258868 PRJEB3181_S_NODE_3349_length_312_cov_1249.545126_g3056_i0 PRJEB3181 3349 312 1249.545126 3898.58079312 Vittaforma corneae 42399 Fungi Fungi 353 7.139999999999998e-93   NTclustered gi|667639983|ref|XR_552275.1| 993615 g3056 i0 91.255 21.2788461538462 263 18 84 4 52 312 886 627 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 6639 353 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
11534309 11534309 PRJEB3181_S_NODE_3590_length_304_cov_17424.944238_g3297_i0 PRJEB3181 3590 304 17424.944238 52971.83048352 Vittaforma corneae 42399 Fungi Fungi 228 4.3899999999999985e-55   NTclustered gi|667639983|ref|XR_552275.1| 993615 g3297 i0 84.082 16.1875 245 30 79 7 64 304 369 130 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 4921 228 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
11534311 11534311 PRJEB3181_S_NODE_4050_length_292_cov_126.918288_g3757_i0 PRJEB3181 4050 292 126.918288 370.60140096 Vittaforma corneae 42399 Fungi Fungi 235 2.5e-57   NTclustered gi|667639983|ref|XR_552275.1| 993615 g3757 i0 84.553 13.3287671232877 246 28 83 8 51 292 369 130 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 3892 235 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
12467987 12467987 PRJEB3181_S_NODE_4430_length_283_cov_4.173387_g4137_i0 PRJEB3181 4430 283 4.173387 11.81068521 Vittaforma 42398 Fungi Fungi 507 4.64e-139   NTclustered gi|38489197|gb|AY375043.1| 255593 g4137 i0 100 95.6325088339223 274 0 97 0 1 274 491 218 Vittaforma-like parasite isolate 5830 small subunit ribosomal RNA gene, partial sequence blastn 27064 507 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma-like parasite isolate 5830
14084325 14084325 PRJEB3181_S_NODE_1192_length_439_cov_3.680693_g911_i0 PRJEB3181 1192 439 3.680693 16.15824227 Vittaforma corneae 42399 Fungi Fungi 473 7.64e-129   NTclustered gi|667639983|ref|XR_552275.1| 993615 g911 i0 86.261 4.12756264236902 444 51 100 9 1 439 1406 968 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 1812 473 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
17907505 17907505 PRJEB3181_P_NODE_10495_length_262_cov_2.658009_g10231_i0 PRJEB3181 10495 262 2.658009 6.96398358 Vittaforma corneae 42399 Fungi Fungi 189 1.7499999999999996e-43   NTclustered gi|667639983|ref|XR_552275.1| 993615 g10231 i0 87.425 1 167 17 63 4 93 258 267 104 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 262 189 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
21732881 21732881 PRJEB3181_S_NODE_5678_length_256_cov_19.895928_g5385_i0 PRJEB3181 5678 256 19.895928 50.93357568 Microsporidium sp. LVPEI.SMW V3S1-FR 1734473 Fungi Fungi 398 2.5899999999999997e-106   NTclustered gi|937656209|gb|KR303710.1| 1734473 g5385 i0 96.653 94.02734375 239 8 93 0 1 239 726 964 Microsporidium sp. LVPEI.SMW V3S1-FR small subunit ribosomal RNA gene, partial sequence blastn 24071 398 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. LVPEI.SMW V3S1-FR
24281994 24281994 PRJEB3181_S_NODE_9640_length_204_cov_28.692308_g9347_i0 PRJEB3181 9640 204 28.692308 58.53230832 Vittaforma corneae 42399 Fungi Fungi 239 1.27e-58   NTclustered gi|667639983|ref|XR_552275.1| 993615 g9347 i0 88.06 1.45098039215686 201 24 99 0 1 201 203 3 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 296 239 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;