RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB3181" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB3181 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4816727 4816727 PRJEB3181_S_NODE_14684_length_169_cov_3.955224_g14391_i0 PRJEB3181 14684 169 3.955224 6.68432856 Melioribacter 1134403 Bacteria Bacteria 119 1.37e-22   NTclustered gi|470490269|ref|NR_076978.1| 1134405 g14391 i0 80.117 208.98224852071 171 25 99 9 1 167 1436 1271 Melioribacter roseus strain P3M-2 23S ribosomal RNA gene, complete sequence blastn 35318 119 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Melioribacter Melioribacter roseus
27096458 27096458 PRJEB3181_P_NODE_11562_length_250_cov_1.817352_g11298_i0 PRJEB3181 11562 250 1.817352 4.54338 Ignavibacteria bacterium 2053306 Bacteria Bacteria 92.4 2.86e-21   NR MFA5403444.1 2053306 g11298 i0 71.4 2.28 63 17 75.6 1 6 194 126 187 MFA5403444.1 FAD-dependent oxidoreductase [Ignavibacteria bacterium] diamond 570 92.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;