RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB3181", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 1 ✖

tax_kingdom 1

  • Thermotogati · 1 ✖

bioproject 1

  • PRJEB3181 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17566672 17566672 PRJEB3181_S_NODE_12894_length_180_cov_1.613793_g12601_i0 PRJEB3181 12894 180 1.613793 2.9048274 Thermanaerovibrio 81461 Bacteria Bacteria 104 4.16e-18   NTclustered gi|470485441|ref|NR_076701.1| 81462 g12601 i0 90.909 1.71111111111111 77 7 43 0 84 160 1468 1392 Thermanaerovibrio acidaminovorans strain Su883 23S ribosomal RNA gene, complete sequence blastn 308 104 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;